RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 IL17FQ96PD4 163 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 FYTTD1Q96QD9 318 aaKnown RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 GSX1Q9H4S2 264 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 SDF2L1Q9HCN8 221 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 TXNL4BQ9NX01 149 aaKnown RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 CLCF1Q9UBD9 225 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 PURGQ9UJV8 347 aaKnown RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 NEUROG3Q9Y4Z2 214 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 IGHV1-69-2A0A0G2JMI3 117 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 CXorf49A8MYA2 514 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 RBFOX2O43251 390 aaKnown RBP eCLIP2.38□□□□□ -2.03
CHD9-202ENST00000398510 ATF1P18846 271 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 NAAAQ02083 359 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 TEX30Q5JUR7 227 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 WDR25Q64LD2 544 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 TEX38Q6PEX7 206 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 Q6ZNX1 250 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 LYG1Q8N1E2 194 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 CIARTQ8N365 385 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 GBGT1Q8N5D6 347 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 TMEM86BQ8N661 226 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 FAM156AQ8NDB6 213 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 ST6GALNAC3Q8NDV1 305 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 TSKUQ8WUA8 353 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 ACY3Q96HD9 319 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 OR5M11Q96RB7 305 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 NIPSNAP1Q9BPW8 284 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 C20orf24Q9BUV8 137 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 NPVFQ9HCQ7 196 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 ASCL3Q9NQ33 180 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 RPH3ALQ9UNE2 315 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 LINC00312Q9Y6C7 94 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 UBE2L5PA0A1B0GUS4 154 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 TMEM250H0YL14 139 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 M0R3E3 92 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 SMAD9O15198 467 aaKnown RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 OR2C1O95371 312 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 IGLV3-19P01714 112 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 IGHMP01871 453 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 FBXO45P0C2W1 286 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 CD99P14209 185 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 SNRPEP62304 92 aaKnown RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 BATFQ16520 125 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 ABLIM2Q6H8Q1 611 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 SLC25A26Q70HW3 274 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 H1FOOQ8IZA3 346 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 TTC9BQ8N6N2 239 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 OSR1Q8TAX0 266 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 ZNF721Q8TF20 911 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 TEAD3Q99594 435 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 SLC50A1Q9BRV3 221 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 PRSS22Q9GZN4 317 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 DEFB127Q9H1M4 99 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 NHP2Q9NX24 153 aaKnown RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 RALYQ9UKM9 306 aaKnown RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 ZFHX3Q15911 3703 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 CXorf65A6NEN9 183 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 A8MWL6 223 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 PRSS1P07477 247 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 SLC10A2Q12908 348 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 KISS1Q15726 138 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 ZNF534Q76KX8 674 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 OR8G5Q8NG78 346 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 OR8A1Q8NGG7 326 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 OR1K1Q8NGR3 316 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 PRSS3P2Q8NHM4 247 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 OR2H1Q9GZK4 316 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 VSIG4Q9Y279 399 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 RAXQ9Y2V3 346 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 LOC105371242A0A075B767 164 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 FAM221AA4D161 298 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 WTIPA6NIX2 430 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 ZNF705FA8MVS1 300 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 PLPP2O43688 288 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 CDK2AP2O75956 126 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 ISG15P05161 165 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 GPX1P07203 203 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 ZNF705DP0CH99 300 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 ERGP11308 486 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 CDC34P49427 236 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 DESI1Q6ICB0 168 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 OR5M8Q8NGP6 311 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 OR51E1Q8TCB6 317 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 TMEM255BQ8WV15 326 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 RLN3Q8WXF3 142 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 MOGAT1Q96PD6 335 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 MS4A10Q96PG2 267 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 SRSF8Q9BRL6 282 aaKnown RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 CABLES2Q9BTV7 478 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 QTRT1Q9BXR0 403 aaKnown RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 GEMIN7Q9H840 131 aaKnown RBP2.38□□□□□ -2.03
CHD9-202ENST00000398510 PSORS1C1Q9UIG5 152 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 PCNTO95613 3336 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 TRGV11A0A075B6L2 103 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 TRAV9-1A0A075B6T8 112 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 ASPDHA6ND91 283 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 H7C1C5 153 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 J3QT63 122 aa2.38□□□□□ -2.03
CHD9-202ENST00000398510 MFNGO00587 321 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms