RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 DECR2Q9NUI1 292 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 ARHGEF17Q96PE2 2063 aaPredicted RBP9.57□□□□□ -0.88
HPS4-202ENST00000398145 RLFQ13129 1914 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 OOEPA6NGQ2 149 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 CXorf1O96002 111 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 SRP19P09132 144 aaKnown RBP9.57□□□□□ -0.88
HPS4-202ENST00000398145 CASP6P55212 293 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 PSG5Q15238 335 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 TMEM183AQ8IXX5 376 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 TP53RKQ96S44 253 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 TECRQ9NZ01 308 aaKnown RBP9.57□□□□□ -0.88
HPS4-202ENST00000398145 MED12Q93074 2177 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 HELTA6NFD8 242 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 DIRC3C9JPN6 131 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 USF1P22415 310 aaPredicted RBP9.56□□□□□ -0.88
HPS4-202ENST00000398145 BRS3P32247 399 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 SNAI3Q3KNW1 292 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 MRPL54Q6P161 138 aaKnown RBP9.56□□□□□ -0.88
HPS4-202ENST00000398145 GTF2H5Q6ZYL4 71 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 OR4S2Q8NH73 311 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 RBKSQ9H477 322 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 MTCL1Q9Y4B5 1905 aaKnown RBP9.56□□□□□ -0.88
HPS4-202ENST00000398145 TRGV5A0A0B4J1U4 118 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 IGKV1D-43A0A0B4J1Z2 117 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 M0R2Z0 102 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 FAM157CP0CG43 387 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 EPHA8P29322 1005 aaPredicted RBP9.56□□□□□ -0.88
HPS4-202ENST00000398145 RAB7AP51149 207 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 FGF11Q92914 225 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 GMPPAQ96IJ6 420 aaPredicted RBP9.56□□□□□ -0.88
HPS4-202ENST00000398145 TXNDC17Q9BRA2 123 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 NGBQ9NPG2 151 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 A0A087WWC5 75 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 SERTM2A0A1B0GWG4 89 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 IGSF23A1L1A6 192 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 C5orf52A6NGY3 159 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 HIST3H3Q16695 136 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 CEACAM21Q3KPI0 293 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 OR2Z1Q8NG97 314 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 TMEM56Q96MV1 263 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 LOC390937A0A1W2PQ73 354 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 KBTBD11O94819 623 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 CD1BP29016 333 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 UBE2L3P68036 154 aaKnown RBP9.56□□□□□ -0.88
HPS4-202ENST00000398145 ETFRF1Q6IPR1 90 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 ZNF488Q96MN9 340 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 TM2D1Q9BX74 207 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 PLA2G3Q9NZ20 509 aa9.56□□□□□ -0.88
HPS4-202ENST00000398145 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 ST8SIA5O15466 376 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 HAND1O96004 215 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 CD5P06127 495 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 ASPHD2Q6ICH7 369 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 TUSC5Q8IXB3 177 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 ZNF784Q8NCA9 323 aaPredicted RBP9.55□□□□□ -0.88
HPS4-202ENST00000398145 ZPBPQ9BS86 351 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 PROCRQ9UNN8 238 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 TRBV6-7A0A0A0MS04 114 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 SRSF10O75494 262 aaKnown RBP9.55□□□□□ -0.88
HPS4-202ENST00000398145 AGAP20933 346 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 KIR2DS2P43631 304 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 ABLIM2Q6H8Q1 611 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 TGIF2LXQ8IUE1 241 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 TMEM230Q96A57 120 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 CBLN4Q9NTU7 201 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 SH3BGRL2Q9UJC5 107 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 TCF21O43680 179 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 RAMP1O60894 148 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 IGHV3-13P01766 116 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 IGHV3-7P01780 117 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 FOLR2P14207 255 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 HIST1H1BP16401 226 aaKnown RBP9.55□□□□□ -0.88
HPS4-202ENST00000398145 MPLP40238 635 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 PAQR4Q8N4S7 273 aaPredicted RBP9.55□□□□□ -0.88
HPS4-202ENST00000398145 PARLQ9H300 379 aa9.55□□□□□ -0.88
HPS4-202ENST00000398145 SLC25A5P05141 298 aaKnown RBP9.54□□□□□ -0.88
HPS4-202ENST00000398145 FCER1GP30273 86 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 Q8WTZ3 238 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 LRRC29Q8WV35 223 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 PSMG3Q9BT73 122 aaPredicted RBP9.54□□□□□ -0.88
HPS4-202ENST00000398145 TMEM191AQ9H0A3 160 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 MT-ND6P03923 174 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 CD99P14209 185 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 GZMHP20718 246 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 OPRK1P41145 380 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 ZNF818PQ6ZRF7 136 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 FGFRL1Q8N441 504 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 RCC1LQ96I51 464 aaKnown RBP9.54□□□□□ -0.88
HPS4-202ENST00000398145 ZDHHC8Q9ULC8 765 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 BRWD3Q6RI45 1802 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A26D6RGX4 464 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 MPDU1O75352 247 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 TEPPQ6URK8 271 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 C19orf35Q6ZS72 473 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 CRIPAKQ8N1N5 446 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 GSX1Q9H4S2 264 aaPredicted RBP9.54□□□□□ -0.88
HPS4-202ENST00000398145 TNS1Q9HBL0 1735 aaKnown RBP9.54□□□□□ -0.88
HPS4-202ENST00000398145 MST1P26927 711 aa9.54□□□□□ -0.88
HPS4-202ENST00000398145 IZUMO4Q1ZYL8 232 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms