RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 RNF126Q9BV68 326 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 A0A1W2PP11 408 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 IFNA4P05014 189 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 SPP1P10451 314 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 CAV2P51636 162 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 TDGF1P3P51864 188 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 HEPN1Q6WQI6 88 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 PNKDQ8N490 385 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 RNASE6Q93091 150 aaKnown RBP4.95□□□□□ -1.62
PTPRD-206ENST00000397617 FAAP24Q9BTP7 215 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 RNF7Q9UBF6 113 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 CCNOP22674 350 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 MC5RP33032 325 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 OR2B8PP59922 312 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 WDR82Q6UXN9 313 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 TMEM14EPQ6UXP3 125 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 CISD2Q8N5K1 135 aaKnown RBP4.95□□□□□ -1.62
PTPRD-206ENST00000397617 SUMF2Q8NBJ7 301 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 TMEM204Q9BSN7 226 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 SEC11CQ9BY50 192 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 C3orf85A0A1B0GTC6 90 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 CXCL2P19875 107 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 OR4D10Q8NGI6 311 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 FLVCR2Q9UPI3 526 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 C2CD3Q4AC94 2353 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 ATP6V1G2-DDX39BF2Z307 99 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 GOSR2O14653 212 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 TSPAN4O14817 238 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 ANGPTL7O43827 346 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 FBXO24O75426 580 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 DANCRP0C864 163 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 IL3RAP26951 378 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 OR4S2Q8NH73 311 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 ZMAT3Q9HA38 289 aaKnown RBP4.94□□□□□ -1.62
PTPRD-206ENST00000397617 NDRG3Q9UGV2 375 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 RAB29O14966 203 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 S100PP25815 95 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 LGALS7P47929 136 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 KLRB1Q12918 225 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 FAM74A3Q4VXF1 159 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 OR10V1Q8NGI7 309 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 OR5D18Q8NGL1 313 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 CACNG8Q8WXS5 425 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 PCGF1Q9BSM1 259 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 SOX7Q9BT81 388 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 RPUSD1Q9UJJ7 312 aaKnown RBP4.94□□□□□ -1.62
PTPRD-206ENST00000397617 MFSD2BA6NFX1 497 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 A6NLC8 198 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 B4DEV8 164 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 ERVH48-1M5A8F1 160 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 HPRT1P00492 218 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 HAND1O96004 215 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 GLI4P10075 376 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 FOXL2P58012 376 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 TMEM155Q4W5P6 130 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 OR2T2Q6IF00 324 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF695Q8IW36 515 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 GVQW1Q8N7I0 195 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 SCCPDHQ8NBX0 429 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 CMBLQ96DG6 245 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 DMRTA2Q96SC8 542 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 RNF115Q9Y4L5 304 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 SYNGR2O43760 224 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 SPCS3P61009 180 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 POLR2GP62487 172 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTPRD-206ENST00000397617 COL9A2Q14055 689 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-206ENST00000397617 Q5BKY6 102 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 OR5T1Q8NG75 326 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 RND1Q92730 232 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 MEGF10Q96KG7 1140 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 TRGV8A0A0C4DH27 118 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 LMX1BO60663 402 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 SNAPINO95295 136 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 GABRR1P24046 479 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 CCL11P51671 97 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 TMEM33P57088 247 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 RTL8BQ17RB0 113 aa4.94□□□□□ -1.62
PTPRD-206ENST00000397617 KHDC3LQ587J8 217 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 DCAF12L2Q5VW00 463 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 RBMXL3Q8N7X1 1067 aaKnown RBP4.93□□□□□ -1.62
PTPRD-206ENST00000397617 LHFPL5Q8TAF8 219 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 GCDHQ92947 438 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-206ENST00000397617 FOXN4Q96NZ1 517 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 TAF9BQ9HBM6 251 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 FN1P02751 2386 aaKnown RBP4.93□□□□□ -1.62
PTPRD-206ENST00000397617 ACANP16112 2415 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 AADACP22760 399 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 CA7P43166 264 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 GPM6AP51674 278 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 DEFB109BQ30KR1 87 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 ANKRD55Q3KP44 614 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 OR1S1Q8NH92 325 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 FGFBP3Q8TAT2 258 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 SPACA5Q96QH8 159 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 NKX6-2Q9C056 277 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-206ENST00000397617 BIN3Q9NQY0 253 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 PRSS50Q9UI38 385 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 TRGV10A0A0A0MS01 117 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 IGHV3-15A0A0B4J1V0 119 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 OR2H2O95918 312 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms