RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SDF2L1Q9HCN8 221 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 Q9N2K0 584 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 LYRM2Q9NU23 88 aaPredicted RBP4.32□□□□□ -1.72
SSR1-202ENST00000397511 RNF150Q9ULK6 438 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 PAM16Q9Y3D7 125 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 ADAMTS20P59510 1910 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 MED13Q9UHV7 2174 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 CNOT1A5YKK6 2376 aaKnown RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 SPTBN2O15020 2390 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 CSMD1Q96PZ7 3565 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 COL5A1P20908 1838 aaPredicted RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 ICE1Q9Y2F5 2266 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 IGHV1-45A0A0A0MS14 117 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 MAP1LC3B2A6NCE7 125 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 MSTNO14793 375 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ATXN7O15265 892 aaPredicted RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 KLF7O75840 302 aaPredicted RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 PFN1P07737 140 aaKnown RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 BMI1P35226 326 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 GALR1P47211 349 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 NPBWR2P48146 333 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 SSR4P51571 173 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 UCP3P55916 312 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 UBE2G2P60604 165 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ERVS71-1P61550 626 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 GRB2P62993 217 aaKnown RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 ABCA11PQ4W5N1 156 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ACTL10Q5JWF8 245 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 C1orf185Q5T7R7 199 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 WDR25Q64LD2 544 aaPredicted RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 FAM90A2PQ658T7 463 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 MRPL14Q6P1L8 145 aaKnown RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 LHFPL1Q86WI0 220 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 FBXL14Q8N1E6 418 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 IL22RA1Q8N6P7 574 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 NECAP1Q8NC96 275 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 UBALD1Q8TB05 177 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 KCNE4Q8WWG9 221 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 NABP1Q96AH0 204 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 BORCS8Q96FH0 119 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 IMMP2LQ96T52 175 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ABHD14AQ9BUJ0 271 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 MAP1LC3BQ9GZQ8 125 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 PLK3Q9H4B4 646 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 PROK2Q9HC23 129 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 TMEM9BQ9NQ34 198 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ANAPC10Q9UM13 185 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ST3GAL6Q9Y274 331 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 CLEC18AA5D8T8 446 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 H7BYZ3 331 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 TOMM40O96008 361 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 COX6A1P12074 109 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 MMP9P14780 707 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 LIFP15018 202 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 TCN2P20062 427 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 S100A7P31151 101 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ECI1P42126 302 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ZNF92Q03936 586 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 GNMTQ14749 295 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 C3AR1Q16581 482 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 HIST3H3Q16695 136 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 CEACAM16Q2WEN9 425 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 SPIN3Q5JUX0 258 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 FAM180AQ6UWF9 173 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 DPPA3Q6W0C5 159 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 TMPRSS7Q7RTY8 843 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 C16orf82Q7Z2V1 217 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 LINC01551Q86U37 167 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 CALHM1Q8IU99 346 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 CMTM1Q8IZ96 169 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 TMEM123Q8N131 208 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 C17orf78Q8N4C9 275 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ZIC4Q8N9L1 334 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 CLEC18CQ8NCF0 446 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 Q8NFD4 153 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 OR52M1Q8NGK5 317 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 IL22RA2Q969J5 263 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 GNPNAT1Q96EK6 184 aaPredicted RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 ATP6V0BQ99437 205 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 DUSP23Q9BVJ7 150 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 HES7Q9BYE0 225 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ZNF442Q9H7R0 627 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 MOB1AQ9H8S9 216 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 GNG13Q9P2W3 67 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 IL36RNQ9UBH0 155 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 KALRNO60229 2985 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 IGKV1-12A0A0C4DH73 117 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 F6UZH7 168 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ST8SIA3O43173 380 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 NDUFB8O95169 186 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 IGKV1D-12P01611 117 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 DTYMKP23919 212 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 GDF1P27539 372 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 FOXG1P55316 489 aaPredicted RBP4.31□□□□□ -1.72
SSR1-202ENST00000397511 GNB2P62879 340 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 MMDQ15546 238 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 ADIRFQ15847 76 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 MPV17LQ2QL34 196 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 TRIM61Q5EBN2 209 aa4.31□□□□□ -1.72
SSR1-202ENST00000397511 CST9LP1Q5W188 147 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms