RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PPIAL4GP0DN37 164 aa22.58■■□□□ 1.21
CPNE1-203ENST00000397442 SUPT4H1P63272 117 aaKnown RBP22.58■■□□□ 1.21
CPNE1-203ENST00000397442 DHRS2Q13268 280 aa22.58■■□□□ 1.21
CPNE1-203ENST00000397442 DEFB113Q30KQ7 82 aa22.58■■□□□ 1.21
CPNE1-203ENST00000397442 C11orf91Q3C1V1 193 aa22.58■■□□□ 1.21
CPNE1-203ENST00000397442 ZNF626Q68DY1 528 aa22.58■■□□□ 1.21
CPNE1-203ENST00000397442 ZNF486Q96H40 463 aaPredicted RBP22.58■■□□□ 1.21
CPNE1-203ENST00000397442 AGMATQ9BSE5 352 aa22.58■■□□□ 1.21
CPNE1-203ENST00000397442 C17orf98A8MV24 154 aa22.58■■□□□ 1.2
CPNE1-203ENST00000397442 SNRPGP15A8MWD9 76 aa22.58■■□□□ 1.2
CPNE1-203ENST00000397442 DNASE1P24855 282 aa22.58■■□□□ 1.2
CPNE1-203ENST00000397442 ZFP36P26651 326 aaKnown RBP22.58■■□□□ 1.2
CPNE1-203ENST00000397442 PIGPP57054 158 aa22.58■■□□□ 1.2
CPNE1-203ENST00000397442 DSCR9P59020 149 aa22.58■■□□□ 1.2
CPNE1-203ENST00000397442 UBE2MP61081 183 aaKnown RBP22.58■■□□□ 1.2
CPNE1-203ENST00000397442 PHLDA2Q53GA4 152 aa22.58■■□□□ 1.2
CPNE1-203ENST00000397442 LEAP2Q969E1 77 aa22.58■■□□□ 1.2
CPNE1-203ENST00000397442 DACT3Q96B18 629 aaPredicted RBP22.58■■□□□ 1.2
CPNE1-203ENST00000397442 IGHV4-61A0A0C4DH41 118 aa22.57■■□□□ 1.2
CPNE1-203ENST00000397442 IGHV3-7P01780 117 aa22.57■■□□□ 1.2
CPNE1-203ENST00000397442 NFYBP25208 207 aa22.57■■□□□ 1.2
CPNE1-203ENST00000397442 ZNF134P52741 427 aa22.57■■□□□ 1.2
CPNE1-203ENST00000397442 GPN1Q9HCN4 374 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-203ENST00000397442 LOC105371242A0A075B767 164 aa22.56■■□□□ 1.2
CPNE1-203ENST00000397442 C9orf170A2RU37 121 aa22.56■■□□□ 1.2
CPNE1-203ENST00000397442 HSD17B6O14756 317 aa22.56■■□□□ 1.2
CPNE1-203ENST00000397442 HLA-AP01891 365 aaKnown RBP22.56■■□□□ 1.2
CPNE1-203ENST00000397442 ABCA11PQ4W5N1 156 aa22.56■■□□□ 1.2
CPNE1-203ENST00000397442 LYG2Q86SG7 212 aa22.56■■□□□ 1.2
CPNE1-203ENST00000397442 ZNF439Q8NDP4 499 aa22.56■■□□□ 1.2
CPNE1-203ENST00000397442 ZNF431Q8TF32 576 aaPredicted RBP22.56■■□□□ 1.2
CPNE1-203ENST00000397442 CHAC2Q8WUX2 184 aa22.56■■□□□ 1.2
CPNE1-203ENST00000397442 A8MXK9 166 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 GPR31O00270 319 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 LY6G6FQ5SQ64 297 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 CD276Q5ZPR3 534 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 LRRC75A-AS1Q8N1F1 130 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 BVESQ8NE79 360 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 EDARADDQ8WWZ3 215 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 RNF150Q9ULK6 438 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 RBM7Q9Y580 266 aaKnown RBP22.55■■□□□ 1.2
CPNE1-203ENST00000397442 NAV2Q8IVL1 2488 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 CRYM-AS1A6NIL9 109 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 SLC31A2O15432 143 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 ST8SIA5O15466 376 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 CREBL2O60519 120 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-203ENST00000397442 RGS11O94810 467 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 CLEC12BQ2HXU8 276 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 RTN4IP1Q8WWV3 396 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-203ENST00000397442 RAB39BQ96DA2 213 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 MBD6Q96DN6 1003 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 PSG11Q9UQ72 335 aa22.55■■□□□ 1.2
CPNE1-203ENST00000397442 VPS13CQ709C8 3753 aa22.54■■□□□ 1.2
CPNE1-203ENST00000397442 ITGB1BP1O14713 200 aa22.54■■□□□ 1.2
CPNE1-203ENST00000397442 LIPFP07098 398 aa22.54■■□□□ 1.2
CPNE1-203ENST00000397442 RND3P61587 244 aa22.54■■□□□ 1.2
CPNE1-203ENST00000397442 PAX2Q02962 417 aa22.54■■□□□ 1.2
CPNE1-203ENST00000397442 OR2AK2Q8NG84 335 aa22.54■■□□□ 1.2
CPNE1-203ENST00000397442 C5orf30Q96GV9 206 aa22.54■■□□□ 1.2
CPNE1-203ENST00000397442 OR2D2Q9H210 308 aa22.54■■□□□ 1.2
CPNE1-203ENST00000397442 MED13LQ71F56 2210 aa22.53■■□□□ 1.2
CPNE1-203ENST00000397442 IGHV1-8P0DP01 117 aa22.53■■□□□ 1.2
CPNE1-203ENST00000397442 VAMP1P23763 118 aa22.53■■□□□ 1.2
CPNE1-203ENST00000397442 RRAS2P62070 204 aaPredicted RBP22.53■■□□□ 1.2
CPNE1-203ENST00000397442 CT45A1Q5HYN5 189 aa22.53■■□□□ 1.2
CPNE1-203ENST00000397442 DRAM1Q8N682 238 aa22.53■■□□□ 1.2
CPNE1-203ENST00000397442 CT45A3Q8NHU0 189 aa22.53■■□□□ 1.2
CPNE1-203ENST00000397442 FAM216AQ8WUB2 273 aa22.53■■□□□ 1.2
CPNE1-203ENST00000397442 GPHA2Q96T91 129 aa22.53■■□□□ 1.2
CPNE1-203ENST00000397442 IFI27L2Q9H2X8 130 aa22.53■■□□□ 1.2
CPNE1-203ENST00000397442 A0A1W2PPH5 198 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 HMX3A6NHT5 357 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 SFT2D2O95562 160 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 ZNF645Q8N7E2 425 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 ABHD14BQ96IU4 210 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 KCNS2Q9ULS6 477 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 A0A087X0M5 115 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 A0A1B0GX30 115 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 RBP4P02753 201 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 LCN2P80188 198 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 AKR1E2Q96JD6 320 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 NAA60Q9H7X0 242 aa22.52■■□□□ 1.2
CPNE1-203ENST00000397442 UNC79Q9P2D8 2635 aa22.51■■□□□ 1.19
CPNE1-203ENST00000397442 A0A1W2PPE3 182 aa22.51■■□□□ 1.19
CPNE1-203ENST00000397442 FAM157AC9JC47 383 aa22.51■■□□□ 1.19
CPNE1-203ENST00000397442 MPPED1O15442 326 aa22.51■■□□□ 1.19
CPNE1-203ENST00000397442 PGLYRP1O75594 196 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-203ENST00000397442 DUS4LO95620 317 aaKnown RBP22.51■■□□□ 1.19
CPNE1-203ENST00000397442 SGPP2Q8IWX5 399 aa22.51■■□□□ 1.19
CPNE1-203ENST00000397442 CMTM1Q8IZ96 169 aa22.51■■□□□ 1.19
CPNE1-203ENST00000397442 CCDC71LQ8N9Z2 235 aa22.51■■□□□ 1.19
CPNE1-203ENST00000397442 ABHD14AQ9BUJ0 271 aa22.51■■□□□ 1.19
CPNE1-203ENST00000397442 SUCNR1Q9BXA5 334 aa22.51■■□□□ 1.19
CPNE1-203ENST00000397442 MED28Q9H204 178 aa22.51■■□□□ 1.19
CPNE1-203ENST00000397442 ABCA2Q9BZC7 2435 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 TEX13DA0A0J9YY54 714 aaPredicted RBP22.5■■□□□ 1.19
CPNE1-203ENST00000397442 TNFSF12O43508 249 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 SSNA1O43805 119 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 FCN2Q15485 313 aa22.5■■□□□ 1.19
CPNE1-203ENST00000397442 SLC9A3R2Q15599 337 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms