RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CD24P25063 80 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 KIR2DS4P43632 304 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 REG1BP48304 166 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 RAB7AP51149 207 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 RORCP51449 518 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 GNG2P59768 71 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 KIR2DS1Q14954 304 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 AWAT1Q58HT5 328 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 OR2AK2Q8NG84 335 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 ABCG5Q9H222 651 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 DIABLOQ9NR28 239 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 TIMM23O14925 209 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 FABP7O15540 132 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 HSPA12AO43301 675 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 NDUFA7O95182 113 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 DTYMKP23919 212 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 LY6G6FQ5SQ64 297 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 OR8H3Q8N146 312 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 LYG1Q8N1E2 194 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 OR4F5Q8NH21 305 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 OR56B4Q8NH76 319 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 RAB2BQ8WUD1 216 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 COMMD3Q9UBI1 195 aa17.02■□□□□ 0.31
TSPAN4-206ENST00000397408 TENM1Q9UKZ4 2725 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 IGKV1-6A0A0C4DH72 117 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 GAPDHP04406 335 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 MDKP21741 143 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 ZBTB25P24278 435 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 ZNF137PP52743 207 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 PITPNAQ00169 270 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 ZNF816Q0VGE8 651 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 SPCS2Q15005 226 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 HERPUD1Q15011 391 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 PNLIPRP3Q17RR3 467 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 Q6ZSV7 163 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 DRAM1Q8N682 238 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 OR4A4PQ8NGN8 299 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 ST6GALNAC6Q969X2 333 aa17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 PARP12Q9H0J9 701 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-206ENST00000397408 ST8SIA5O15466 376 aa17■□□□□ 0.31
TSPAN4-206ENST00000397408 NOL3O60936 208 aaKnown RBP17■□□□□ 0.31
TSPAN4-206ENST00000397408 GSTT2P0CG29 244 aa17■□□□□ 0.31
TSPAN4-206ENST00000397408 GSTT2BP0CG30 244 aa17■□□□□ 0.31
TSPAN4-206ENST00000397408 TMBIM6P55061 237 aa17■□□□□ 0.31
TSPAN4-206ENST00000397408 FBLN7Q53RD9 439 aa17■□□□□ 0.31
TSPAN4-206ENST00000397408 CAPSLQ8WWF8 208 aa17■□□□□ 0.31
TSPAN4-206ENST00000397408 RTN4IP1Q8WWV3 396 aaPredicted RBP17■□□□□ 0.31
TSPAN4-206ENST00000397408 ACOT12Q8WYK0 555 aa17■□□□□ 0.31
TSPAN4-206ENST00000397408 CFHR4Q92496 578 aa17■□□□□ 0.31
TSPAN4-206ENST00000397408 S100A16Q96FQ6 103 aaKnown RBP17■□□□□ 0.31
TSPAN4-206ENST00000397408 BCL7BQ9BQE9 202 aa17■□□□□ 0.31
TSPAN4-206ENST00000397408 CABLES2Q9BTV7 478 aa17■□□□□ 0.31
TSPAN4-206ENST00000397408 IGHV1-3A0A0C4DH29 117 aa16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 SSX5O60225 188 aa16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 CEACAM6P40199 344 aa16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 SRSF7Q16629 238 aaKnown RBP eCLIP16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 MOB3BQ86TA1 216 aa16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 TGIF2LXQ8IUE1 241 aa16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 DTX3Q8N9I9 347 aa16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 AP3S1Q92572 193 aa16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 ST6GALNAC5Q9BVH7 336 aa16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 IFI27L2Q9H2X8 130 aa16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 AUNIPQ9H7T9 357 aa16.99■□□□□ 0.31
TSPAN4-206ENST00000397408 IGKV1D-8A0A087WSZ0 117 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 BET1O15155 118 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 XRCC3O43542 346 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 EIF4EP06730 217 aaKnown RBP16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 LPLP06858 475 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 SNRNP70P08621 437 aaKnown RBP16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 ZNF182P17025 639 aaPredicted RBP16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 IGSF11Q5DX21 431 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 TMEM69Q5SWH9 247 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 Q6ZS49 121 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 OR4C13Q8NGP0 309 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 EDARADDQ8WWZ3 215 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 NPFFR1Q9GZQ6 430 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 BEX1Q9HBH7 125 aa16.98■□□□□ 0.31
TSPAN4-206ENST00000397408 IGHV3-72A0A0B4J1Y9 119 aa16.97■□□□□ 0.31
TSPAN4-206ENST00000397408 FAM90A9PA6NNJ1 464 aa16.97■□□□□ 0.31
TSPAN4-206ENST00000397408 TXNL1O43396 289 aa16.97■□□□□ 0.31
TSPAN4-206ENST00000397408 FAM106CPP0CH98 169 aa16.97■□□□□ 0.31
TSPAN4-206ENST00000397408 PTHLHP12272 177 aa16.97■□□□□ 0.31
TSPAN4-206ENST00000397408 ODF3L1Q8IXM7 274 aa16.97■□□□□ 0.31
TSPAN4-206ENST00000397408 RDH8Q9NYR8 311 aa16.97■□□□□ 0.31
TSPAN4-206ENST00000397408 MMP24Q9Y5R2 645 aa16.97■□□□□ 0.31
TSPAN4-206ENST00000397408 SAA2-SAA4A0A096LPE2 208 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 ITGB1BP1O14713 200 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 LANCL1O43813 399 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 HPGDSO60760 199 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 TSPAN9O75954 239 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 SAA2P0DJI9 122 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 OR3A3P47888 321 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 TAS2R20P59543 309 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 HES1Q14469 280 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 HABP2Q14520 560 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 MZT2AQ6P582 158 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 C3orf56Q8N813 242 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 OR10J5Q8NHC4 309 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 LINC01006Q8NI28 216 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 ISOC1Q96CN7 298 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms