RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ZNF251Q9BRH9 671 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 TAS2R4Q9NYW5 299 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 PLECQ15149 4684 aaKnown RBP6.76□□□□□ -1.33
CAPN3-208ENST00000397204 STARD9Q9P2P6 4700 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 CSMD3Q7Z407 3707 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 IGHV7-81A0A0B4J1V7 117 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 MAGEA13PA6NCF6 341 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 LDLRAD4O15165 306 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 ATP6V0E1O15342 81 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 ATP5HO75947 161 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 HBZP02008 142 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 GP9P14770 177 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 GABRB1P18505 474 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 SERPINA2P20848 420 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 MYF6P23409 242 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 BDKRB2P30411 391 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 ALDH3A2P51648 485 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 GTF2A1P52655 376 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-208ENST00000397204 ACTBP60709 375 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 GABPB1Q06547 395 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-208ENST00000397204 TMEM267Q0VDI3 215 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-208ENST00000397204 C5orf64Q2M2E5 130 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 SLC22A6Q4U2R8 563 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 MORN2Q502X0 79 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 LY6G6FQ5SQ64 297 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 DDI2Q5TDH0 399 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 ZNF660Q6AZW8 331 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-208ENST00000397204 ACSM6Q6P461 480 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 NPBQ8NG41 125 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 OR10V1Q8NGI7 309 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 OR1L1Q8NH94 360 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 RGP1Q92546 391 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-208ENST00000397204 RITA1Q96K30 269 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 OR4C12Q96R67 309 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 TM2D3Q9BRN9 247 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 ANKRD60Q9BZ19 345 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 TOLLIPQ9H0E2 274 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 CST11Q9H112 138 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 TAF9BQ9HBM6 251 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 AMBNQ9NP70 447 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 ISYNA1Q9NPH2 558 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 OR2S2Q9NQN1 319 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 PARP11Q9NR21 331 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 ETAA1Q9NY74 926 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 RCC2Q9P258 522 aaKnown RBP6.76□□□□□ -1.33
CAPN3-208ENST00000397204 AASSQ9UDR5 926 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 MRPS28Q9Y2Q9 187 aaKnown RBP6.76□□□□□ -1.33
CAPN3-208ENST00000397204 RPL36Q9Y3U8 105 aaKnown RBP6.76□□□□□ -1.33
CAPN3-208ENST00000397204 LRRC42Q9Y546 428 aa6.76□□□□□ -1.33
CAPN3-208ENST00000397204 FAM90A7PA6NKC0 464 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 TRIM64CA6NLI5 447 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 FAM90A23PA8MXZ1 464 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 A8MZ25 164 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 SHOXO15266 292 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 NBR2O15453 112 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 OGG1O15527 345 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 YPEL1O60688 119 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 SC5DO75845 299 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 HSPB1P04792 205 aaKnown RBP6.75□□□□□ -1.33
CAPN3-208ENST00000397204 OR8U9P0C7N5 309 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 LIMS3P0CW19 117 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 LIMS4P0CW20 117 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 RCC1P18754 421 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-208ENST00000397204 FUT3P21217 361 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 BLVRBP30043 206 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-208ENST00000397204 CRIP2P52943 208 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-208ENST00000397204 HTD2P86397 168 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 RIPK1Q13546 671 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 ZIK1Q3SY52 487 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-208ENST00000397204 RAB12Q6IQ22 244 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 CDH26Q8IXH8 852 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 Q8N1Y9 231 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 PRR18Q8N4B5 295 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 TCTEX1D1Q8N7M0 179 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 OR52I1Q8NGK6 324 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 OR4K15Q8NH41 348 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 FLYWCH2Q96CP2 140 aaKnown RBP6.75□□□□□ -1.33
CAPN3-208ENST00000397204 RBMXL1Q96E39 390 aaKnown RBP6.75□□□□□ -1.33
CAPN3-208ENST00000397204 YPEL2Q96QA6 119 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 ZNF184Q99676 751 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-208ENST00000397204 NABP2Q9BQ15 211 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 FGF20Q9NP95 211 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-208ENST00000397204 KCNIP1Q9NZI2 227 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 KIAA1456Q9P272 454 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 FOXA2Q9Y261 457 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-208ENST00000397204 NUBP2Q9Y5Y2 271 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 PEX16Q9Y5Y5 336 aa6.75□□□□□ -1.33
CAPN3-208ENST00000397204 A0A1W2PP11 408 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 EI24O14681 340 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 RGS11O94810 467 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 NDUFA3O95167 84 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 LGALS1P09382 135 aaKnown RBP6.74□□□□□ -1.33
CAPN3-208ENST00000397204 IGFBP3P17936 291 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-208ENST00000397204 CNTFRP26992 372 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 DCKP27707 260 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 CD40LGP29965 261 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 VEGFCP49767 419 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 SLURP1P55000 103 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 CX3CL1P78423 397 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 ADARB1P78563 741 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms