RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 GAPTQ8N292 157 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 SYS1Q8N2H4 156 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 Q8N402 240 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 TMEM106AQ96A25 262 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 MYCBPQ99417 103 aaPredicted RBP11.39□□□□□ -0.59
SEC13-206ENST00000397102 S100A13Q99584 98 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 PDCD1LG2Q9BQ51 273 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 SPACA1Q9HBV2 294 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 ETAA1Q9NY74 926 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 TAS2R4Q9NYW5 299 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 RCC2Q9P258 522 aaKnown RBP11.39□□□□□ -0.59
SEC13-206ENST00000397102 JPT1Q9UK76 154 aa11.39□□□□□ -0.59
SEC13-206ENST00000397102 MCRIP1C9JLW8 97 aa11.38□□□□□ -0.59
SEC13-206ENST00000397102 ZNF780AO75290 641 aaPredicted RBP11.38□□□□□ -0.59
SEC13-206ENST00000397102 TRGV3P03979 118 aa11.38□□□□□ -0.59
SEC13-206ENST00000397102 TFAP2AP05549 437 aa11.38□□□□□ -0.59
SEC13-206ENST00000397102 GTF2F2P13984 249 aa11.38□□□□□ -0.59
SEC13-206ENST00000397102 RCC1P18754 421 aaPredicted RBP11.38□□□□□ -0.59
SEC13-206ENST00000397102 ZNF93P35789 620 aaPredicted RBP11.38□□□□□ -0.59
SEC13-206ENST00000397102 GNGT1P63211 74 aa11.38□□□□□ -0.59
SEC13-206ENST00000397102 GNMTQ14749 295 aa11.38□□□□□ -0.59
SEC13-206ENST00000397102 PLGLAQ15195 96 aa11.38□□□□□ -0.59
SEC13-206ENST00000397102 MOGAT2Q3SYC2 334 aa11.38□□□□□ -0.59
SEC13-206ENST00000397102 TRUB1Q8WWH5 349 aaKnown RBP11.38□□□□□ -0.59
SEC13-206ENST00000397102 FAM103A1Q9BTL3 118 aaKnown RBP11.38□□□□□ -0.59
SEC13-206ENST00000397102 ALG8Q9BVK2 526 aa11.38□□□□□ -0.59
SEC13-206ENST00000397102 POMPQ9Y244 141 aa11.38□□□□□ -0.59
SEC13-206ENST00000397102 EXOGQ9Y2C4 368 aaKnown RBP11.38□□□□□ -0.59
SEC13-206ENST00000397102 SAA2-SAA4A0A096LPE2 208 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 A0A1W2PP11 408 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 FCN1O00602 326 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 SAA2P0DJI9 122 aaPredicted RBP11.37□□□□□ -0.59
SEC13-206ENST00000397102 SOX2P48431 317 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 MRPL28Q13084 256 aaKnown RBP11.37□□□□□ -0.59
SEC13-206ENST00000397102 DDI2Q5TDH0 399 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 FAM131AQ6UXB0 335 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 LFNGQ8NES3 379 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 OR52L2PQ8NGH6 319 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 MRPS24Q96EL2 167 aaKnown RBP11.37□□□□□ -0.59
SEC13-206ENST00000397102 RDH12Q96NR8 316 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 ISG20L2Q9H9L3 353 aaKnown RBP11.37□□□□□ -0.59
SEC13-206ENST00000397102 PLEKHA3Q9HB20 300 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 TAF9BQ9HBM6 251 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 TMEM138Q9NPI0 162 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 SIGLEC8Q9NYZ4 499 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 GAB2Q9UQC2 676 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 GMPPBQ9Y5P6 360 aa11.37□□□□□ -0.59
SEC13-206ENST00000397102 C13orf42A0A1B0GVH6 325 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 E9PI62 339 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 YPEL1O60688 119 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 CA11O75493 328 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 CD2P06729 351 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 PPP1CCP36873 323 aaKnown RBP11.36□□□□□ -0.59
SEC13-206ENST00000397102 OR3A3P47888 321 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 SYNJ2BPP57105 145 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 SLC22A6Q4U2R8 563 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 LY6G6FQ5SQ64 297 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 SLC25A30Q5SVS4 291 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 MEDAGQ5VYS4 303 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 FAM71F2Q6NXP2 309 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 ZNF554Q86TJ5 538 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 LHFPL3Q86UP9 236 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 YPEL2Q96QA6 119 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 MBNL3Q9NUK0 354 aaKnown RBP11.36□□□□□ -0.59
SEC13-206ENST00000397102 IMPAD1Q9NX62 359 aa11.36□□□□□ -0.59
SEC13-206ENST00000397102 ANKRD34BA5PLL1 514 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 IZUMO1RA6ND01 250 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 H3BUA1 57 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 SC5DO75845 299 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 BRI3O95415 125 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 FADS2O95864 444 aaKnown RBP11.35□□□□□ -0.59
SEC13-206ENST00000397102 CSN3P07498 182 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 GYS2P54840 703 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 CD81P60033 236 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 PPP3R1P63098 170 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 HTD2P86397 168 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 GPR176Q14439 515 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 RAB12Q6IQ22 244 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 ZNF562Q6V9R5 426 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 POC5Q8NA72 575 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 OR2K2Q8NGT1 345 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 RGP1Q92546 391 aaPredicted RBP11.35□□□□□ -0.59
SEC13-206ENST00000397102 KCNIP1Q9NZI2 227 aa11.35□□□□□ -0.59
SEC13-206ENST00000397102 PCLOQ9Y6V0 5065 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 A0A0G2JLM5 398 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 OR5H14A6NHG9 310 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 SNTNA6NMZ2 147 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 RBBP9O75884 186 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 TPPPO94811 219 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 FASP25445 335 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 BDKRB2P30411 391 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 GBX2P52951 348 aaPredicted RBP11.34□□□□□ -0.59
SEC13-206ENST00000397102 DNAL1Q4LDG9 190 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 LAX1Q8IWV1 398 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 OR2AK2Q8NG84 335 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 GPR148Q8TDV2 347 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 LGALS12Q96DT0 336 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 IFI27L2Q9H2X8 130 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 ZNF355PQ9NSJ1 428 aa11.34□□□□□ -0.59
SEC13-206ENST00000397102 PEX16Q9Y5Y5 336 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms