RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PACRGLQ8N7B6 248 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 OR4K15Q8NH41 348 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 RGP1Q92546 391 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 ZNF184Q99676 751 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 NABP2Q9BQ15 211 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 TAF9BQ9HBM6 251 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 TPSG1Q9NRR2 321 aa13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 MBNL3Q9NUK0 354 aaKnown RBP13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 SMPD3Q9NY59 655 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 RRP15Q9Y3B9 282 aaKnown RBP13.52□□□□□ -0.25
EXOSC3-202ENST00000396521 HSPA12AO43301 675 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 YPEL1O60688 119 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 FUT3P21217 361 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 GTF2A1P52655 376 aaPredicted RBP13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 C19orf54Q5BKX5 351 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 FAM53AQ6NSI3 398 aaPredicted RBP13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 FAM71F2Q6NXP2 309 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 CD200R1LQ6Q8B3 271 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 SGPP2Q8IWX5 399 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 OR52I1Q8NGK6 324 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 OR1L1Q8NH94 360 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 YPEL2Q96QA6 119 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 SLA2Q9H6Q3 261 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 EDA2RQ9HAV5 297 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 STUB1Q9UNE7 303 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 PEX16Q9Y5Y5 336 aa13.51□□□□□ -0.25
EXOSC3-202ENST00000396521 RYR2Q92736 4967 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 TRIM64CA6NLI5 447 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 RCC1P18754 421 aaPredicted RBP13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 SLURP1P55000 103 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 AKIRIN2Q53H80 203 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 OGFRL1Q5TC84 451 aaPredicted RBP13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 ZNF833PQ6ZTB9 187 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 ZNF555Q8NEP9 628 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 ARPC1AQ92747 370 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 RDH12Q96NR8 316 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 SLC29A1Q99808 456 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 VCX3BQ9H321 246 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 AMBNQ9NP70 447 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 C19orf73Q9NVV2 129 aa13.5□□□□□ -0.25
EXOSC3-202ENST00000396521 A0A1W2PN81 502 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 CASQ2O14958 399 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 LIMS3P0CW19 117 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 LIMS4P0CW20 117 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 IGHV4-30-4P0DP06 118 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 IGFBP3P17936 291 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 DCKP27707 260 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 MC5RP33032 325 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 CHRNA7P36544 502 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 ANKRD13BQ86YJ7 626 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 OR2AK2Q8NG84 335 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 IL17DQ8TAD2 202 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 GALMQ96C23 342 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 SMIM19Q96E16 107 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 RNF5Q99942 180 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 SPATA25Q9BR10 227 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 MRPL20Q9BYC9 149 aaKnown RBP13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 FGF20Q9NP95 211 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 PIPOXQ9P0Z9 390 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 NUBP2Q9Y5Y2 271 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 SACSQ9NZJ4 4579 aa13.49□□□□□ -0.25
EXOSC3-202ENST00000396521 A0A1W2PP11 408 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 IRGMA1A4Y4 181 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 RRHO14718 337 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 OGG1O15527 345 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 RBBP9O75884 186 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 ATP6V1G2O95670 118 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 IFNA6P05013 189 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 CX3CL1P78423 397 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 ADARB1P78563 741 aaKnown RBP13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 SRSF7Q16629 238 aaKnown RBP eCLIP13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 ECSCRQ19T08 205 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 Q499Y3 187 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 YIF1BQ5BJH7 314 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 ZFAND6Q6FIF0 208 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 ODF3L1Q8IXM7 274 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 Q8N1Y9 231 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 RITA1Q96K30 269 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 BABAM2Q9NXR7 383 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 STEAP1Q9UHE8 339 aa13.48□□□□□ -0.25
EXOSC3-202ENST00000396521 IGHV4OR15-8A0A075B7B6 117 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 A0A087WW49 117 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 OR5H14A6NHG9 310 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 SOX15O60248 233 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 IGLV1-51P01701 117 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 FSTP19883 344 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 ZP3P21754 424 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 CNTFRP26992 372 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 PLGLAQ15195 96 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 MOGAT2Q3SYC2 334 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 ACTBL2Q562R1 376 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 GLIPR1L1Q6UWM5 242 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 CYGBQ8WWM9 190 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 ALX4Q9H161 411 aaPredicted RBP13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 RANGRFQ9HD47 186 aaPredicted RBP13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 ABRACLQ9P1F3 81 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 GHRLQ9UBU3 117 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 AASSQ9UDR5 926 aa13.47□□□□□ -0.25
EXOSC3-202ENST00000396521 TRBV5-5A0A0J9YX44 114 aa13.46□□□□□ -0.25
EXOSC3-202ENST00000396521 H0Y980 276 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms