RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MAGT1Q9H0U3 335 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 MMP26Q9NRE1 261 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 LYRM2Q9NU23 88 aaPredicted RBP12.51□□□□□ -0.41
CBX3-202ENST00000396386 JKAMPQ9P055 326 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 IGHV3OR15-7A0A075B7D8 119 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 IGSF23A1L1A6 192 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 SPINT2O43291 252 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 PITX3O75364 302 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 FBXO24O75426 580 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 MED6O75586 246 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 SCO1O75880 301 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 FAM87AP0C7U9 286 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 TNFSF4P23510 183 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 PTAFRP25105 342 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 SSTR5P35346 364 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 AKR1C2P52895 323 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 UCNP55089 124 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 TNFAIP6P98066 277 aaPredicted RBP12.51□□□□□ -0.41
CBX3-202ENST00000396386 SMIM8Q96KF7 97 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 WFDC1Q9HC57 220 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 FAM24AA6NFZ4 105 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 MGST3O14880 152 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 IGKV1-39P01597 117 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 IGKV1D-39P04432 117 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 PPP1CCP36873 323 aaKnown RBP12.5□□□□□ -0.41
CBX3-202ENST00000396386 NHLH2Q02577 135 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 IL34Q6ZMJ4 242 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 STPG2Q8N412 459 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 GINS3Q9BRX5 216 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 IL19Q9UHD0 177 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 KIAA2026Q5HYC2 2103 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 APC2O95996 2303 aa12.5□□□□□ -0.41
CBX3-202ENST00000396386 RAI1Q7Z5J4 1906 aaPredicted RBP12.49□□□□□ -0.41
CBX3-202ENST00000396386 ODAMA1E959 279 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 NXPH3O95157 252 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 LHBP01229 141 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 IGHV1-46P01743 117 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 CD80P33681 288 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 BLOC1S1P78537 153 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 CATR1Q13166 79 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 TUSC1Q2TAM9 212 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 MST1LQ2TV78 715 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 ZNF585BQ52M93 769 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 PXDC1Q5TGL8 231 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 BPIFCQ8NFQ6 507 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 ESRP2Q9H6T0 727 aaKnown RBP12.49□□□□□ -0.41
CBX3-202ENST00000396386 CACNG5Q9UF02 275 aa12.49□□□□□ -0.41
CBX3-202ENST00000396386 ANKRD11Q6UB99 2663 aaPredicted RBP12.49□□□□□ -0.41
CBX3-202ENST00000396386 C15orf65H3BRN8 121 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 IGKV1-5P01602 117 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 ADH4P08319 380 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 SEC11BP0C7V7 166 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 LPAR6P43657 344 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 HTD2P86397 168 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 BAXQ07812 192 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 ZNF808Q8N4W9 903 aaPredicted RBP12.48□□□□□ -0.41
CBX3-202ENST00000396386 NARS2Q96I59 477 aaKnown RBP12.48□□□□□ -0.41
CBX3-202ENST00000396386 FAM212BQ9NTI7 297 aaPredicted RBP12.48□□□□□ -0.41
CBX3-202ENST00000396386 RNF7Q9UBF6 113 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 RNF150Q9ULK6 438 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 ARID1AO14497 2285 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 ABCD4O14678 606 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 EIF4EBP1Q13541 118 aaPredicted RBP12.48□□□□□ -0.41
CBX3-202ENST00000396386 ZNF266Q14584 549 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 SWI5Q1ZZU3 235 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 TMEM252Q8N6L7 170 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 FAM222BQ8WU58 562 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 C5orf30Q96GV9 206 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 DCTN5Q9BTE1 182 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 PARP11Q9NR21 331 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 RNF115Q9Y4L5 304 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 IGF2RP11717 2491 aa12.48□□□□□ -0.41
CBX3-202ENST00000396386 ZGRF1Q86YA3 2104 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 IGHV3-43A0A0B4J1X8 118 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 CHST1O43916 411 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 THBDP07204 575 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 IGHV3-43DP0DP04 118 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 SPP1P10451 314 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 FAM53AQ6NSI3 398 aaPredicted RBP12.47□□□□□ -0.41
CBX3-202ENST00000396386 SUN5Q8TC36 379 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 RND1Q92730 232 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 GCM1Q9NP62 436 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 JPT1Q9UK76 154 aa12.47□□□□□ -0.41
CBX3-202ENST00000396386 DPRXA6NFQ7 191 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 K7N7A8 449 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 TMEM50AO95807 157 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 GZMHP20718 246 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 RPL23AP62750 156 aaKnown RBP12.46□□□□□ -0.41
CBX3-202ENST00000396386 BSPH1Q075Z2 132 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 CLINT1Q14677 625 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 IZUMO4Q1ZYL8 232 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 Q6ZRG5 221 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 ZNF561Q8N587 486 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 TCTEX1D1Q8N7M0 179 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 RFESDQ8TAC1 157 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 Q8TCH9 128 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 FAM216AQ8WUB2 273 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 TCTEX1D2Q8WW35 142 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 EDARADDQ8WWZ3 215 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms