RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 PARD6GQ9BYG4 376 aaPredicted RBP13.28□□□□□ -0.28
HOXA3-202ENST00000396352 WDR61Q9GZS3 305 aaKnown RBP13.28□□□□□ -0.28
HOXA3-202ENST00000396352 PRSS50Q9UI38 385 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 R4GN57 208 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 RD3LP0DJH9 198 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 ACP1P24666 158 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 APLNRP35414 380 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 SPATA46Q5T0L3 261 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 MOB1BQ7L9L4 216 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 C1orf87Q8N0U7 546 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 FRZBQ92765 325 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 P2RX4Q99571 388 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 SSX3Q99909 188 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 SPRY4Q9C004 299 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 GP6Q9HCN6 339 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 TMEM9BQ9NQ34 198 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 LIN7CQ9NUP9 197 aaKnown RBP13.28□□□□□ -0.28
HOXA3-202ENST00000396352 DNAJC13O75165 2243 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 TMEM265A0A087WTH1 108 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 SIRPB1O00241 398 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 OR2H2O95918 312 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 IL18BPO95998 194 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 MT-CO3P00414 261 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 HBG1P69891 147 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 HBG2P69892 147 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 TMEM41BQ5BJD5 291 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 LILRB2Q8N423 598 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 TMEM251Q8N6I4 163 aa13.28□□□□□ -0.28
HOXA3-202ENST00000396352 CLDN34H7C241 214 aa13.27□□□□□ -0.28
HOXA3-202ENST00000396352 TRGC1P0CF51 173 aa13.27□□□□□ -0.28
HOXA3-202ENST00000396352 OR1C1Q15619 314 aa13.27□□□□□ -0.28
HOXA3-202ENST00000396352 UBALD2Q8IYN6 164 aa13.27□□□□□ -0.28
HOXA3-202ENST00000396352 OR4C12Q96R67 309 aa13.27□□□□□ -0.28
HOXA3-202ENST00000396352 STRADBQ9C0K7 418 aa13.27□□□□□ -0.28
HOXA3-202ENST00000396352 VAX2Q9UIW0 290 aa13.27□□□□□ -0.28
HOXA3-202ENST00000396352 KCNS2Q9ULS6 477 aa13.27□□□□□ -0.28
HOXA3-202ENST00000396352 ZNF16P17020 682 aaPredicted RBP13.27□□□□□ -0.29
HOXA3-202ENST00000396352 MYPOPQ86VE0 399 aaPredicted RBP13.27□□□□□ -0.29
HOXA3-202ENST00000396352 GPR61Q9BZJ8 451 aa13.27□□□□□ -0.29
HOXA3-202ENST00000396352 SMOC1Q9H4F8 434 aa13.27□□□□□ -0.29
HOXA3-202ENST00000396352 ERVK11-1P61568 191 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 NKX6-1P78426 367 aaPredicted RBP13.26□□□□□ -0.29
HOXA3-202ENST00000396352 CLN3Q13286 438 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 ABHD17BQ5VST6 288 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 MRGPRGQ86SM5 289 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 DRAM1Q8N682 238 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 OR10D4PQ8NGN7 298 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 RBKSQ9H477 322 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 MAP1LC3B2A6NCE7 125 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 ZNF729A6NN14 1252 aaPredicted RBP13.26□□□□□ -0.29
HOXA3-202ENST00000396352 WDR1O75083 606 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 PLA2G5P39877 138 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 SPANXN5Q5MJ07 72 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 WDR25Q64LD2 544 aaPredicted RBP13.26□□□□□ -0.29
HOXA3-202ENST00000396352 LINC00469Q8N7U9 141 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 ZNF383Q8NA42 475 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 MAP1LC3BQ9GZQ8 125 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 MBNL3Q9NUK0 354 aaKnown RBP13.26□□□□□ -0.29
HOXA3-202ENST00000396352 PLA2G3Q9NZ20 509 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 TRAPPC2LQ9UL33 140 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 ELOA3CA0A087WX78 387 aaPredicted RBP13.26□□□□□ -0.29
HOXA3-202ENST00000396352 PPP1R2P9O14990 202 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 IGKV1D-33P01593 117 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 IGKV1-33P01594 117 aa13.26□□□□□ -0.29
HOXA3-202ENST00000396352 ELLP55199 621 aaPredicted RBP13.26□□□□□ -0.29
HOXA3-202ENST00000396352 TAF15Q92804 592 aaKnown RBP eCLIP13.26□□□□□ -0.29
HOXA3-202ENST00000396352 CEBPZOSA8MTT3 80 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 PDZD11Q5EBL8 140 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 MDP1Q86V88 176 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 SCCPDHQ8NBX0 429 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 PRO3102Q9H379 93 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 C12orf49Q9H741 205 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 KIAA2026Q5HYC2 2103 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 TRBV24-1A0A075B6N3 115 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 UBE2L5PA0A1B0GUS4 154 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 C9orf172C9J069 976 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 TMEM14EPQ6UXP3 125 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 BEND4Q6ZU67 534 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 FGFRL1Q8N441 504 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 BCL2L2Q92843 193 aaPredicted RBP13.25□□□□□ -0.29
HOXA3-202ENST00000396352 PINX1Q96BK5 328 aaKnown RBP13.25□□□□□ -0.29
HOXA3-202ENST00000396352 ZPBPQ9BS86 351 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 PRDM13Q9H4Q3 707 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 WIPI2Q9Y4P8 454 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 RBM7Q9Y580 266 aaKnown RBP13.25□□□□□ -0.29
HOXA3-202ENST00000396352 COL6A3P12111 3177 aa13.25□□□□□ -0.29
HOXA3-202ENST00000396352 CEACAM6P40199 344 aa13.24□□□□□ -0.29
HOXA3-202ENST00000396352 CD81P60033 236 aa13.24□□□□□ -0.29
HOXA3-202ENST00000396352 SLC38A11Q08AI6 406 aa13.24□□□□□ -0.29
HOXA3-202ENST00000396352 PMS2P11Q13670 270 aa13.24□□□□□ -0.29
HOXA3-202ENST00000396352 C9orf152Q5JTZ5 239 aa13.24□□□□□ -0.29
HOXA3-202ENST00000396352 RPP25LQ8N5L8 163 aaKnown RBP13.24□□□□□ -0.29
HOXA3-202ENST00000396352 RTL8AQ9BWD3 113 aa13.24□□□□□ -0.29
HOXA3-202ENST00000396352 FOXJ2Q9P0K8 574 aa13.24□□□□□ -0.29
HOXA3-202ENST00000396352 TRIOBPQ9H2D6 2365 aa13.24□□□□□ -0.29
HOXA3-202ENST00000396352 FAM90A26D6RGX4 464 aa13.24□□□□□ -0.29
HOXA3-202ENST00000396352 GATCO43716 136 aaKnown RBP13.23□□□□□ -0.29
HOXA3-202ENST00000396352 ZNF737O75373 536 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 PTBP3O95758 552 aaKnown RBP13.23□□□□□ -0.29
HOXA3-202ENST00000396352 TNFRSF9Q07011 255 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms