RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 IGSF11Q5DX21 431 aa16■□□□□ 0.15
SNCA-203ENST00000394986 DHRS7BQ6IAN0 325 aaPredicted RBP16■□□□□ 0.15
SNCA-203ENST00000394986 CCDC144NLQ6NUI1 221 aa16■□□□□ 0.15
SNCA-203ENST00000394986 LYG1Q8N1E2 194 aa16■□□□□ 0.15
SNCA-203ENST00000394986 OR56B4Q8NH76 319 aa16■□□□□ 0.15
SNCA-203ENST00000394986 YPEL2Q96QA6 119 aa16■□□□□ 0.15
SNCA-203ENST00000394986 DIABLOQ9NR28 239 aa16■□□□□ 0.15
SNCA-203ENST00000394986 A0A0A6YYH2 397 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 A6NJ64 397 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 OOSP1A8MZH6 123 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 ST8SIA5O15466 376 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 HSPA12AO43301 675 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 RGS11O94810 467 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 MNDAP41218 407 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 DRAM1Q8N682 238 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 OR2AK2Q8NG84 335 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 ST6GALNAC6Q969X2 333 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 ISOC1Q96CN7 298 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 RBMXL1Q96E39 390 aaKnown RBP15.99■□□□□ 0.15
SNCA-203ENST00000394986 S100A16Q96FQ6 103 aaKnown RBP15.99■□□□□ 0.15
SNCA-203ENST00000394986 ST6GALNAC5Q9BVH7 336 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 AUNIPQ9H7T9 357 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 CEPT1Q9Y6K0 416 aa15.99■□□□□ 0.15
SNCA-203ENST00000394986 STAB1Q9NY15 2570 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 H3BMQ9 156 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 BET1O15155 118 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 XRCC3O43542 346 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 HPGDSO60760 199 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 ZNF182P17025 639 aaPredicted RBP15.98■□□□□ 0.15
SNCA-203ENST00000394986 MDKP21741 143 aaPredicted RBP15.98■□□□□ 0.15
SNCA-203ENST00000394986 DTYMKP23919 212 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 IL3RAP26951 378 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 BRS3P32247 399 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 CEACAM6P40199 344 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 KIR2DS4P43632 304 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 RAB7AP51149 207 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 ARHGDIBP52566 201 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 RAG2P55895 527 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 KIR2DS1Q14954 304 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 PNLIPRP3Q17RR3 467 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 OR4A4PQ8NGN8 299 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 CFHR4Q92496 578 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 IFI27L2Q9H2X8 130 aa15.98■□□□□ 0.15
SNCA-203ENST00000394986 IGHV3-72A0A0B4J1Y9 119 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 IGHV1-3A0A0C4DH29 117 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 NOL3O60936 208 aaKnown RBP15.97■□□□□ 0.15
SNCA-203ENST00000394986 GAPDHP04406 335 aaKnown RBP15.97■□□□□ 0.15
SNCA-203ENST00000394986 ZBTB25P24278 435 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 OR3A3P47888 321 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 ZNF816Q0VGE8 651 aaPredicted RBP15.97■□□□□ 0.15
SNCA-203ENST00000394986 AWAT1Q58HT5 328 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 TMEM69Q5SWH9 247 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 Q6ZSV7 163 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 ODF3L1Q8IXM7 274 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 CAPSLQ8WWF8 208 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 RTN4IP1Q8WWV3 396 aaPredicted RBP15.97■□□□□ 0.15
SNCA-203ENST00000394986 ACOT12Q8WYK0 555 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 BCL7BQ9BQE9 202 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 CABLES2Q9BTV7 478 aa15.97■□□□□ 0.15
SNCA-203ENST00000394986 DNHD1Q96M86 4753 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 FCER2P06734 321 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 SNRNP70P08621 437 aaKnown RBP15.96■□□□□ 0.15
SNCA-203ENST00000394986 ELK1P19419 428 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 ZNF137PP52743 207 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 TAS2R20P59543 309 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 RPL15P61313 204 aaKnown RBP15.96■□□□□ 0.15
SNCA-203ENST00000394986 PITPNAQ00169 270 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 LY6G6FQ5SQ64 297 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 MOB3BQ86TA1 216 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 OR8H3Q8N146 312 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 GVQW1Q8N7I0 195 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 C11orf54Q9H0W9 315 aaPredicted RBP15.96■□□□□ 0.15
SNCA-203ENST00000394986 RDH8Q9NYR8 311 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 TENM1Q9UKZ4 2725 aa15.96■□□□□ 0.15
SNCA-203ENST00000394986 SAA2-SAA4A0A096LPE2 208 aa15.95■□□□□ 0.14
SNCA-203ENST00000394986 MEIS3P1A6NDR6 274 aa15.95■□□□□ 0.14
SNCA-203ENST00000394986 APOA1P02647 267 aa15.95■□□□□ 0.14
SNCA-203ENST00000394986 SAA2P0DJI9 122 aaPredicted RBP15.95■□□□□ 0.14
SNCA-203ENST00000394986 SRSF7Q16629 238 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNCA-203ENST00000394986 LIAT1Q6ZQX7 453 aa15.95■□□□□ 0.14
SNCA-203ENST00000394986 Q6ZS49 121 aa15.95■□□□□ 0.14
SNCA-203ENST00000394986 TGIF2LXQ8IUE1 241 aa15.95■□□□□ 0.14
SNCA-203ENST00000394986 DYNC2LI1Q8TCX1 351 aa15.95■□□□□ 0.14
SNCA-203ENST00000394986 AP3S1Q92572 193 aa15.95■□□□□ 0.14
SNCA-203ENST00000394986 ABHD14BQ96IU4 210 aa15.95■□□□□ 0.14
SNCA-203ENST00000394986 PITPNC1Q9UKF7 332 aa15.95■□□□□ 0.14
SNCA-203ENST00000394986 TRBV6-7A0A0A0MS04 114 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 CCDC160A6NGH7 325 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 ZNF736B4DX44 427 aaPredicted RBP15.94■□□□□ 0.14
SNCA-203ENST00000394986 NDUFA7O95182 113 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 COMPP49747 757 aaPredicted RBP15.94■□□□□ 0.14
SNCA-203ENST00000394986 FOXL1Q12952 345 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 MZT2AQ6P582 158 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 C12orf54Q6X4T0 127 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 SPATA3Q8NHX4 192 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 MRPL20Q9BYC9 149 aaKnown RBP15.94■□□□□ 0.14
SNCA-203ENST00000394986 RAB18Q9NP72 206 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 RNF150Q9ULK6 438 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 FAM90A9PA6NNJ1 464 aa15.94■□□□□ 0.14
SNCA-203ENST00000394986 FAM25AB3EWG3 89 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms