RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 IGLV2-14P01704 120 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 RD3LP0DJH9 198 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 BCL2P10415 239 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 IAPPP10997 89 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 SSPNQ14714 243 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 LCN15Q6UWW0 184 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 ZNF525Q8N782 197 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 SCGB1C1Q8TD33 95 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 ARGFXA6NJG6 315 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 SYNGR2O43760 224 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 SERPINA7P05543 415 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 WNT2P09544 360 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 METTL15P1P0C7V9 234 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 FAM58AQ8N1B3 248 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 LINC00469Q8N7U9 141 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 MBD3L1Q8WWY6 194 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 IL1F10Q8WWZ1 152 aa15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 BOKQ9UMX3 212 aaPredicted RBP15.56■□□□□ 0.08
PCDHA1-202ENST00000394633 TRAV39A0A0B4J263 110 aa15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 IGKV1-5P01602 117 aa15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 FGF8P55075 233 aaPredicted RBP15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 CLDN18P56856 261 aa15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 GFI1BQ5VTD9 330 aa15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 OR13D1Q8NGV5 346 aa15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 LSM10Q969L4 123 aaKnown RBP15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 PSENENQ9NZ42 101 aa15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 LRFN1Q9P244 771 aa15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 SEC14L6B5MCN3 397 aa15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 IGFBP7Q16270 282 aa15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 CA5BP1Q8WTZ4 195 aa15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 PSMG3Q9BT73 122 aaPredicted RBP15.55■□□□□ 0.08
PCDHA1-202ENST00000394633 C21orf140B9A014 251 aa15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 DEGS1O15121 323 aa15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 RHBDL1O75783 438 aa15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 SOD3P08294 240 aa15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 RND2P52198 227 aa15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 ZNF573Q86YE8 665 aa15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 MED12LQ86YW9 2145 aa15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 HIST3H2BBQ8N257 126 aa15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 RCC1LQ96I51 464 aaKnown RBP15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 FAM210BQ96KR6 192 aa15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 ZNF703Q9H7S9 590 aaPredicted RBP15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 OR14J1Q9UGF5 321 aa15.54■□□□□ 0.08
PCDHA1-202ENST00000394633 PIGBOS1A0A0B4J2F0 54 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 ANKRD30BLA7E2S9 258 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 NPIPB11E5RHQ5 1161 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 GNG3P63215 75 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 PNRC1Q12796 327 aaPredicted RBP15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 TESK1Q15569 626 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 ZNF383Q8NA42 475 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 OR2M7Q8NG81 312 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 OR10D4PQ8NGN7 298 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 ABHD5Q8WTS1 349 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 GPR87Q9BY21 358 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 GPR61Q9BZJ8 451 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 ASCL3Q9NQ33 180 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 PPP1R3CQ9UQK1 317 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 CEP295Q9C0D2 2601 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 MGAQ8IWI9 3026 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 OR5B21A6NL26 309 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 ZNF729A6NN14 1252 aaPredicted RBP15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 CYB5R3P00387 301 aaPredicted RBP15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 TRGC1P0CF51 173 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 ARR3P36575 388 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 WNT5AP41221 380 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 NKX6-1P78426 367 aaPredicted RBP15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 LRRC75BQ2VPJ9 315 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 ZNF585BQ52M93 769 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 Q6P435 159 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 C1orf87Q8N0U7 546 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 FRZBQ92765 325 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 HES7Q9BYE0 225 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 OR51B6Q9H340 312 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 SDF2L1Q9HCN8 221 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 TMEM242Q9NWH2 141 aa15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 PRRC2CQ9Y520 2896 aaKnown RBP15.53■□□□□ 0.08
PCDHA1-202ENST00000394633 SRSF6Q13247 344 aaKnown RBP15.52■□□□□ 0.08
PCDHA1-202ENST00000394633 C9orf152Q5JTZ5 239 aa15.52■□□□□ 0.08
PCDHA1-202ENST00000394633 OPA3Q9H6K4 179 aa15.52■□□□□ 0.08
PCDHA1-202ENST00000394633 TREM2Q9NZC2 230 aa15.52■□□□□ 0.08
PCDHA1-202ENST00000394633 RNF150Q9ULK6 438 aa15.52■□□□□ 0.08
PCDHA1-202ENST00000394633 MPC1Q9Y5U8 109 aa15.52■□□□□ 0.08
PCDHA1-202ENST00000394633 DOCK7Q96N67 2140 aa15.52■□□□□ 0.08
PCDHA1-202ENST00000394633 CLDN34H7C241 214 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 PPP1R2P9O14990 202 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 NEURL1O76050 574 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 SYNGR4O95473 234 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 MDH2P40926 338 aaKnown RBP15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 PDZD11Q5EBL8 140 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 ATP1A1-AS1Q5TC04 95 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 OR2T2Q6IF00 324 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 THOC3Q96J01 351 aaKnown RBP15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 SSX3Q99909 188 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 FAM173AQ9BQD7 235 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 PKIBQ9C010 78 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 OR51I2Q9H344 312 aa15.52■□□□□ 0.07
PCDHA1-202ENST00000394633 ELOA3CA0A087WX78 387 aaPredicted RBP15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 LRP5LA4QPB2 252 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 GATCO43716 136 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms