RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 HIST1H2BHQ93079 126 aa11.81□□□□□ -0.52
GAPVD1-205ENST00000394084 HIST1H2BNQ99877 126 aa11.81□□□□□ -0.52
GAPVD1-205ENST00000394084 HIST1H2BMQ99879 126 aa11.81□□□□□ -0.52
GAPVD1-205ENST00000394084 NCOR1O75376 2440 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 CEBPZOSA8MTT3 80 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 HMGB3O15347 200 aaKnown RBP11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 MDKP21741 143 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 CEACAM6P40199 344 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 CDX1P47902 265 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 CEBPDP49716 269 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 HOXA4Q00056 320 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 FAM53AQ6NSI3 398 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 RCC1LQ96I51 464 aaKnown RBP11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 GTF3C1Q12789 2109 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 J3QT63 122 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 IL18BPO95998 194 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 CELA3BP08861 270 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 S100A2P29034 98 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 ERVS71-1P61550 626 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 RPS16P62249 146 aaKnown RBP11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 PYY3Q5JQD4 70 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 PEAR1Q5VY43 1037 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 OR4C12Q96R67 309 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 DEFB127Q9H1M4 99 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 CACNA1DQ01668 2161 aa11.8□□□□□ -0.52
GAPVD1-205ENST00000394084 UBE2L5PA0A1B0GUS4 154 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 CDIPTO14735 213 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 ALKBH6Q3KRA9 238 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 SSX3Q99909 188 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 SIRT7Q9NRC8 400 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 IGHV2-70P01814 119 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 ACP1P24666 158 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 SCCPDHQ8NBX0 429 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 ARHGAP21Q5T5U3 1957 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 TRAV1-1A0A0B4J248 108 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 SLC25A6P12236 298 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 MDH2P40926 338 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 MEOX1P50221 254 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 DRAM1Q8N682 238 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 OR10D4PQ8NGN7 298 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 LSM10Q969L4 123 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 FAM210BQ96KR6 192 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 GPR61Q9BZJ8 451 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 PKIBQ9C010 78 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 STRADBQ9C0K7 418 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 OPA3Q9H6K4 179 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 GAR1Q9NY12 217 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 CISD1Q9NZ45 108 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 ABI3Q9P2A4 366 aa11.79□□□□□ -0.52
GAPVD1-205ENST00000394084 NXPH2O95156 264 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 CLDN1O95832 211 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 GRPP07492 148 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 C9orf152Q5JTZ5 239 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 DCAF10Q5QP82 559 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 CDX2Q99626 313 aaPredicted RBP11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 OR2J1Q9GZK6 312 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 TMEM9BQ9NQ34 198 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 MAP1LC3B2A6NCE7 125 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 HBG1P69891 147 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 HBG2P69892 147 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 NKX6-1P78426 367 aaPredicted RBP11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 LRRC75BQ2VPJ9 315 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 ZNF808Q8N4W9 903 aaPredicted RBP11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 CA5BP1Q8WTZ4 195 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 RTL8AQ9BWD3 113 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 MAP1LC3BQ9GZQ8 125 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 LIN7CQ9NUP9 197 aaKnown RBP11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 DOCK11Q5JSL3 2073 aa11.78□□□□□ -0.52
GAPVD1-205ENST00000394084 A0A1W2PNU3 283 aaPredicted RBP11.77□□□□□ -0.52
GAPVD1-205ENST00000394084 CXorf65A6NEN9 183 aa11.77□□□□□ -0.52
GAPVD1-205ENST00000394084 SOD3P08294 240 aa11.77□□□□□ -0.52
GAPVD1-205ENST00000394084 ZNF497Q6ZNH5 498 aa11.77□□□□□ -0.52
GAPVD1-205ENST00000394084 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.77□□□□□ -0.52
GAPVD1-205ENST00000394084 FGFRL1Q8N441 504 aa11.77□□□□□ -0.52
GAPVD1-205ENST00000394084 FRZBQ92765 325 aa11.77□□□□□ -0.52
GAPVD1-205ENST00000394084 RBKSQ9H477 322 aa11.77□□□□□ -0.52
GAPVD1-205ENST00000394084 KRASP01116 189 aa11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 TFF1P04155 84 aa11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 TRGC1P0CF51 173 aa11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 IDH3GP51553 393 aaPredicted RBP11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 SLC38A11Q08AI6 406 aa11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 ZNF816Q0VGE8 651 aaPredicted RBP11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 CXorf67Q86X51 503 aaPredicted RBP11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 C1orf87Q8N0U7 546 aa11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 WDR61Q9GZS3 305 aaKnown RBP11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 IL17BQ9UHF5 180 aa11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 PRRC2CQ9Y520 2896 aaKnown RBP11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 RAMP3O60896 148 aa11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 CD55P08174 381 aa11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 MBD3L1Q8WWY6 194 aa11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 BCL2L2Q92843 193 aaPredicted RBP11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 IER2Q9BTL4 223 aa11.77□□□□□ -0.53
GAPVD1-205ENST00000394084 KMT2EQ8IZD2 1858 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 USF3Q68DE3 2245 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 IGKV1D-33P01593 117 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 IGKV1-33P01594 117 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 ZNF383Q8NA42 475 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 OR1L1Q8NH94 360 aa11.76□□□□□ -0.53
GAPVD1-205ENST00000394084 ABHD5Q8WTS1 349 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms