RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 ZNF645Q8N7E2 425 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 OR2Z1Q8NG97 314 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 LRRC29Q8WV35 223 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 MUCL1Q96DR8 90 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 LURAP1Q96LR2 239 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 NKX6-2Q9C056 277 aaPredicted RBP7.58□□□□□ -1.2
TDP1-202ENST00000393452 SH3BGRL3Q9H299 93 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 LUZP4Q9P127 313 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 CACFD1Q9UGQ2 172 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 METRNQ9UJH8 293 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 KCNS2Q9ULS6 477 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 SPTBN2O15020 2390 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 ICE1Q9Y2F5 2266 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 RNF212BA8MTL3 300 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 FAM157AC9JC47 383 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 RNASEK-C17orf49H0YIS7 233 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 M0R1B8 84 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 DNASE2O00115 360 aaPredicted RBP7.57□□□□□ -1.2
TDP1-202ENST00000393452 WRBO00258 174 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 TFF1P04155 84 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 IL2RGP31785 369 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 GABRA2P47869 451 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 ID4P47928 161 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 ASCL1P50553 236 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 GUCA2BQ16661 112 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 FAM180AQ6UWF9 173 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 PUSL1Q8N0Z8 303 aaKnown RBP7.57□□□□□ -1.2
TDP1-202ENST00000393452 COMMD1Q8N668 190 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 CD177Q8N6Q3 437 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 HSD17B11Q8NBQ5 300 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 RAB40CQ96S21 281 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 SPOCK3Q9BQ16 436 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 TMEM231Q9H6L2 316 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 TREM1Q9NP99 234 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 FAM96BQ9Y3D0 163 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 STRAPQ9Y3F4 350 aaKnown RBP7.57□□□□□ -1.2
TDP1-202ENST00000393452 WSB1Q9Y6I7 421 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 DSCAMO60469 2012 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 A8MXE2 369 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 TRIM77I1YAP6 450 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 K7N7A8 449 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 EGR1P18146 543 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 EPHA1P21709 976 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 GLIPR1P48060 266 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 DVL1P1P54792 670 aaPredicted RBP7.57□□□□□ -1.2
TDP1-202ENST00000393452 KLF3P57682 345 aaPredicted RBP7.57□□□□□ -1.2
TDP1-202ENST00000393452 CLINT1Q14677 625 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 IZUMO4Q1ZYL8 232 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 KRBOX4Q5JUW0 171 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 OR52L2PQ8NGH6 319 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 OR13A1Q8NGR1 328 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 OR5C1Q8NGR4 320 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 MRGPRDQ8TDS7 321 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 C5orf30Q96GV9 206 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 SCRT1Q9BWW7 348 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 CACNG5Q9UF02 275 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 DUSP13Q9UII6 198 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 DSCAML1Q8TD84 2053 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 BOD1L1Q8NFC6 3051 aa7.57□□□□□ -1.2
TDP1-202ENST00000393452 IGKV1D-17A0A075B6S4 117 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 F8W036 122 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 TXNL1O43396 289 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 CST7O76096 145 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 OMGP23515 440 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 ATP6V0CP27449 155 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 PRDX2P32119 198 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 FHITP49789 147 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 TDGF1P3P51864 188 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 CR1LQ2VPA4 569 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 TRAT1Q6PIZ9 186 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 GCSAMQ8N6F7 178 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 OR2D2Q9H210 308 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 COA4Q9NYJ1 87 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 FAM74A7A6NL05 159 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 UMAD1C9J7I0 102 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 C15orf65H3BRN8 121 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 TSPAN4O14817 238 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 SYNGR2O43760 224 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 GFRA3O60609 400 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 C1QL1O75973 258 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 NXPH3O95157 252 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 LHBP01229 141 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 ZNF16P17020 682 aaPredicted RBP7.56□□□□□ -1.2
TDP1-202ENST00000393452 SSTR5P35346 364 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 SNCAP37840 140 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 GATA4P43694 442 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 DYNLT3P51808 116 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 RPL23AP62750 156 aaKnown RBP7.56□□□□□ -1.2
TDP1-202ENST00000393452 HTD2P86397 168 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 FAM74A3Q4VXF1 159 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 MIDNQ504T8 468 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 FAM53AQ6NSI3 398 aaPredicted RBP7.56□□□□□ -1.2
TDP1-202ENST00000393452 C22orf34Q6ZV56 151 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 FGFRL1Q8N441 504 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 RNASE11Q8TAA1 199 aaKnown RBP7.56□□□□□ -1.2
TDP1-202ENST00000393452 NINJ1Q92982 152 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 ABHD17AQ96GS6 310 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 MEGF10Q96KG7 1140 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 OR2V2Q96R30 315 aa7.56□□□□□ -1.2
TDP1-202ENST00000393452 AGMATQ9BSE5 352 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms