RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 RNASE11Q8TAA1 199 aaKnown RBP11.97□□□□□ -0.49
MKS1-203ENST00000393120 NINJ1Q92982 152 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 GNPNAT1Q96EK6 184 aaPredicted RBP11.97□□□□□ -0.49
MKS1-203ENST00000393120 SH3BGRL3Q9H299 93 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 C19orf12Q9NSK7 152 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 CACNG5Q9UF02 275 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 METRNQ9UJH8 293 aa11.97□□□□□ -0.49
MKS1-203ENST00000393120 INTS1Q8N201 2190 aaKnown RBP11.96□□□□□ -0.49
MKS1-203ENST00000393120 FAM157AC9JC47 383 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 FAM90A26D6RGX4 464 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 K7N7A8 449 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 LHBP01229 141 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 ADH4P08319 380 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 GZMHP20718 246 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 EPHA1P21709 976 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 OMGP23515 440 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 SNCAP37840 140 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 GATA4P43694 442 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 CAMLGP49069 296 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 SULT1A1P50225 295 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 DYNLT3P51808 116 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 CLINT1Q14677 625 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 ZNF295-AS1Q8N0V1 137 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 PUSL1Q8N0Z8 303 aaKnown RBP11.96□□□□□ -0.49
MKS1-203ENST00000393120 PPP1R35Q8TAP8 253 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 MRGPRDQ8TDS7 321 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 MEGF10Q96KG7 1140 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 SNX22Q96L94 193 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 FAM96BQ9Y3D0 163 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 MMP24Q9Y5R2 645 aa11.96□□□□□ -0.49
MKS1-203ENST00000393120 IGKV1D-17A0A075B6S4 117 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 C15orf65H3BRN8 121 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 TSPAN4O14817 238 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 SYNGR2O43760 224 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 DFFBO76075 338 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 ATP6V0CP27449 155 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 ASCL1P50553 236 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 HOXA4Q00056 320 aaPredicted RBP11.96□□□□□ -0.5
MKS1-203ENST00000393120 GUCA2BQ16661 112 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 ASCL5Q7RTU5 278 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 STX12Q86Y82 276 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 FGFRL1Q8N441 504 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 OR13A1Q8NGR1 328 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 ABHD17AQ96GS6 310 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 ATP5SQ99766 215 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 OR2D2Q9H210 308 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 NCOR1P1Q9H4R4 102 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 TMEM231Q9H6L2 316 aa11.96□□□□□ -0.5
MKS1-203ENST00000393120 GTF3C1Q12789 2109 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 ZNF292O60281 2723 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 TOR1AO14656 332 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 SPINT2O43291 252 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 CST7O76096 145 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 SNAPINO95295 136 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 ZNF16P17020 682 aaPredicted RBP11.95□□□□□ -0.5
MKS1-203ENST00000393120 EGR1P18146 543 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 ID4P47928 161 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 TDGF1P3P51864 188 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 CATR1Q13166 79 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 MIDNQ504T8 468 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 ZNF66Q6ZN08 573 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 MRGPRGQ86SM5 289 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 GCSAMQ8N6F7 178 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 OR2V2Q96R30 315 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 SCRT1Q9BWW7 348 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 HIPK2Q9H2X6 1198 aa11.95□□□□□ -0.5
MKS1-203ENST00000393120 A0A1B0GW64 132 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 MGST3O14880 152 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 PRH1P02810 166 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 TFF1P04155 84 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 P0C879 139 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 CD80P33681 288 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 PEA15Q15121 130 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 DOLPP1Q86YN1 238 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 LFNGQ8NES3 379 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 OR2G3Q8NGZ4 309 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 C5orf30Q96GV9 206 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 ELOVL5Q9NYP7 299 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 RNF150Q9ULK6 438 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 PRRG2O14669 202 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 AGPAT2O15120 278 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 SFTA3P0C7M3 94 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 FHITP49789 147 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 SELENOVP59797 346 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 ZNF616Q08AN1 781 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 FAM27E3Q08E93 113 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 IZUMO4Q1ZYL8 232 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 AGMATQ9BSE5 352 aa11.94□□□□□ -0.5
MKS1-203ENST00000393120 ODAMA1E959 279 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 FAM74A7A6NL05 159 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 C9JQL5 133 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 ATP6V1G2-DDX39BF2Z307 99 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 C1QL1O75973 258 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 NXPH3O95157 252 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 CD40P25942 277 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 SSTR5P35346 364 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 PPP1CCP36873 323 aaKnown RBP11.93□□□□□ -0.5
MKS1-203ENST00000393120 RPL30P62888 115 aaKnown RBP11.93□□□□□ -0.5
MKS1-203ENST00000393120 FAM74A3Q4VXF1 159 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 DPPA3Q6W0C5 159 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms