RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 RNF141Q8WVD5 230 aa16.78■□□□□ 0.28
PTPN11-202ENST00000392597 DIRC2Q96SL1 478 aa16.78■□□□□ 0.28
PTPN11-202ENST00000392597 NCOR1P1Q9H4R4 102 aa16.78■□□□□ 0.28
PTPN11-202ENST00000392597 PPP1R3CQ9UQK1 317 aa16.78■□□□□ 0.28
PTPN11-202ENST00000392597 A0A1B0GU03 582 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 A8MXK9 166 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 ABCD4O14678 606 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 SPINT2O43291 252 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 ADH4P08319 380 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 HTD2P86397 168 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 ID3Q02535 119 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 CR1LQ2VPA4 569 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 OR13A1Q8NGR1 328 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 FAM216AQ8WUB2 273 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 TMED6Q8WW62 240 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 LSM10Q969L4 123 aaKnown RBP16.77■□□□□ 0.27
PTPN11-202ENST00000392597 RNF7Q9UBF6 113 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 PCNX1Q96RV3 2341 aa16.77■□□□□ 0.27
PTPN11-202ENST00000392597 GZMHP20718 246 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 CACNA1DQ01668 2161 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 CCDC28AQ8IWP9 274 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 UBAC2Q8NBM4 344 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 BBC3Q96PG8 261 aaPredicted RBP16.76■□□□□ 0.27
PTPN11-202ENST00000392597 GCM1Q9NP62 436 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 NGBQ9NPG2 151 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 OR2S2Q9NQN1 319 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 ODAMA1E959 279 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 C15orf65H3BRN8 121 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 K7N7A8 449 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 SHOXO15266 292 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 CASP6P55212 293 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 BSPH1Q075Z2 132 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 BOLLQ8N9W6 283 aaKnown RBP16.76■□□□□ 0.27
PTPN11-202ENST00000392597 OR52L2PQ8NGH6 319 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 ARL11Q969Q4 196 aa16.76■□□□□ 0.27
PTPN11-202ENST00000392597 FAM208BQ5VWN6 2430 aa16.75■□□□□ 0.27
PTPN11-202ENST00000392597 PITX3O75364 302 aa16.75■□□□□ 0.27
PTPN11-202ENST00000392597 CD55P08174 381 aa16.74■□□□□ 0.27
PTPN11-202ENST00000392597 ZP3P21754 424 aa16.74■□□□□ 0.27
PTPN11-202ENST00000392597 ADIPOQQ15848 244 aa16.74■□□□□ 0.27
PTPN11-202ENST00000392597 ZNF561Q8N587 486 aa16.74■□□□□ 0.27
PTPN11-202ENST00000392597 OR2C3Q8N628 320 aa16.74■□□□□ 0.27
PTPN11-202ENST00000392597 OR2D2Q9H210 308 aa16.74■□□□□ 0.27
PTPN11-202ENST00000392597 ARV1Q9H2C2 271 aa16.74■□□□□ 0.27
PTPN11-202ENST00000392597 FAM212BQ9NTI7 297 aaPredicted RBP16.74■□□□□ 0.27
PTPN11-202ENST00000392597 IGHV3OR15-7A0A075B7D8 119 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 KRBOX1C9JBD0 128 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 FAM157CP0CG43 387 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 SSTR5P35346 364 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 POLR2GP62487 172 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTPN11-202ENST00000392597 EDDM3AQ14507 147 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 CXorf66Q5JRM2 361 aaPredicted RBP16.73■□□□□ 0.27
PTPN11-202ENST00000392597 TCTEX1D1Q8N7M0 179 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 TPRX1Q8N7U7 411 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 GPR146Q96CH1 333 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 SDSLQ96GA7 329 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 POLEQ07864 2286 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 BORCS7-ASMTA0A0B4J1R7 106 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 VSTM5A8MXK1 200 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 IGKV1-39P01597 117 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 IGKV1D-39P04432 117 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 OR4A8P0C604 315 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 EIF4EBP1Q13541 118 aaPredicted RBP16.73■□□□□ 0.27
PTPN11-202ENST00000392597 ZNF585BQ52M93 769 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 SAT2Q96F10 170 aaPredicted RBP16.73■□□□□ 0.27
PTPN11-202ENST00000392597 SLC25A31Q9H0C2 315 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 LYRM2Q9NU23 88 aaPredicted RBP16.73■□□□□ 0.27
PTPN11-202ENST00000392597 ICE1Q9Y2F5 2266 aa16.73■□□□□ 0.27
PTPN11-202ENST00000392597 PPP1CCP36873 323 aaKnown RBP16.72■□□□□ 0.27
PTPN11-202ENST00000392597 CA7P43166 264 aa16.72■□□□□ 0.27
PTPN11-202ENST00000392597 ASCL1P50553 236 aa16.72■□□□□ 0.27
PTPN11-202ENST00000392597 STUMQ69YW2 141 aa16.72■□□□□ 0.27
PTPN11-202ENST00000392597 OR6C3Q9NZP0 311 aa16.72■□□□□ 0.27
PTPN11-202ENST00000392597 LPAR3Q9UBY5 353 aa16.72■□□□□ 0.27
PTPN11-202ENST00000392597 JPT1Q9UK76 154 aa16.72■□□□□ 0.27
PTPN11-202ENST00000392597 TRGV8A0A0C4DH27 118 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 A0A0G2JRQ6 117 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 NUDT19A8MXV4 375 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 SSSCA1O60232 199 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 TNFRSF1AP19438 455 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 CD80P33681 288 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 VAMP2P63027 116 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 EWSR1Q01844 656 aaKnown RBP eCLIP16.71■□□□□ 0.27
PTPN11-202ENST00000392597 CATR1Q13166 79 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 ST6GALNAC3Q8NDV1 305 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 RNASE11Q8TAA1 199 aaKnown RBP16.71■□□□□ 0.27
PTPN11-202ENST00000392597 EDARADDQ8WWZ3 215 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 C14orf79Q96F83 325 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 WFIKKN1Q96NZ8 548 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 RAB9BQ9NP90 201 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 CFAP46Q8IYW2 2715 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 NBASA2RRP1 2371 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 C17orf100A8MU93 164 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 MUC1P15941 1255 aaPredicted RBP16.71■□□□□ 0.27
PTPN11-202ENST00000392597 ZNRF1Q8ND25 227 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 SMIM3Q9BZL3 60 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 TAS2R3Q9NYW6 316 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 RNF115Q9Y4L5 304 aa16.71■□□□□ 0.27
PTPN11-202ENST00000392597 RAB19A4D1S5 217 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 F2RL2O00254 374 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms