RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 Q6YL49 198 aa12.09□□□□□ -0.47
SUMO1-203ENST00000392246 SLC25A48Q6ZT89 311 aaKnown RBP12.09□□□□□ -0.47
SUMO1-203ENST00000392246 ZNF439Q8NDP4 499 aa12.09□□□□□ -0.47
SUMO1-203ENST00000392246 OR10J5Q8NHC4 309 aa12.09□□□□□ -0.47
SUMO1-203ENST00000392246 CT45A3Q8NHU0 189 aa12.09□□□□□ -0.47
SUMO1-203ENST00000392246 MEGF9Q9H1U4 602 aa12.09□□□□□ -0.47
SUMO1-203ENST00000392246 OR1A1Q9P1Q5 309 aa12.09□□□□□ -0.47
SUMO1-203ENST00000392246 ZNRD1Q9P1U0 126 aa12.09□□□□□ -0.47
SUMO1-203ENST00000392246 CUBNO60494 3623 aa12.09□□□□□ -0.47
SUMO1-203ENST00000392246 TRBV6-7A0A0A0MS04 114 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 A0A0A6YYJ9 748 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 FABP12A6NFH5 140 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 ITGB1BP1O14713 200 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 SSX2Q16385 188 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 OR2AK2Q8NG84 335 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 EDARADDQ8WWZ3 215 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 GINS4Q9BRT9 223 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 ABHD14AQ9BUJ0 271 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 TOLLIPQ9H0E2 274 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 ANAPC10Q9UM13 185 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 HILPDAQ9Y5L2 63 aa12.08□□□□□ -0.48
SUMO1-203ENST00000392246 LY6LH3BQJ8 138 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 SLC31A2O15432 143 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 TCF21O43680 179 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 IL3RAP26951 378 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 ARPC4P59998 168 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 MRPS10P82664 201 aaKnown RBP12.07□□□□□ -0.48
SUMO1-203ENST00000392246 CNPY1Q3B7I2 92 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 LDLRAD3Q86YD5 345 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 OR6Q1Q8NGQ2 317 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 FCAMRQ8WWV6 532 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 JMJD8Q96S16 334 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 SOSTQ9BQB4 213 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 RDH8Q9NYR8 311 aa12.07□□□□□ -0.48
SUMO1-203ENST00000392246 OOSP1A8MZH6 123 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 GABARAPH6UMI1 98 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 CTDSPLO15194 276 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 FCER2P06734 321 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 NAT1P18440 290 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 RAB7AP51149 207 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 BAMBIQ13145 260 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 TPTE2P1Q5T6R2 138 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 DYNAPQ8N1N2 210 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 OR5AP2Q8NGF4 316 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 OR52I2Q8NH67 350 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 SNAPC3Q92966 411 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 RPEQ96AT9 228 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 RBBP9O75884 186 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 PAX6P26367 422 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 RCVRNP35243 200 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 HILS1P60008 231 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 AANATQ16613 207 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 CCDC144NLQ6NUI1 221 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 FAM131AQ6UXB0 335 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 CCDC190Q86UF4 302 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 H1FOOQ8IZA3 346 aaPredicted RBP12.06□□□□□ -0.48
SUMO1-203ENST00000392246 LYG1Q8N1E2 194 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 SSMEM1Q8WWF3 244 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 TOMM40LQ969M1 308 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 PARP12Q9H0J9 701 aaKnown RBP12.06□□□□□ -0.48
SUMO1-203ENST00000392246 C11orf54Q9H0W9 315 aaPredicted RBP12.06□□□□□ -0.48
SUMO1-203ENST00000392246 DPAGT1Q9H3H5 408 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 GHITMQ9H3K2 345 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 NECAP2Q9NVZ3 263 aa12.06□□□□□ -0.48
SUMO1-203ENST00000392246 SETD2Q9BYW2 2564 aaPredicted RBP12.05□□□□□ -0.48
SUMO1-203ENST00000392246 ST8SIA5O15466 376 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 HOXA3O43365 443 aaPredicted RBP12.05□□□□□ -0.48
SUMO1-203ENST00000392246 IER3P46695 156 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 ARHGDIBP52566 201 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 ZNF137PP52743 207 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 TAS2R46P59540 309 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 ACTBP60709 375 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 ACTG1P63261 375 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 CDK10Q15131 360 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 LRRC75BQ2VPJ9 315 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 RNASE12Q5GAN4 147 aaKnown RBP12.05□□□□□ -0.48
SUMO1-203ENST00000392246 SPANXN2Q5MJ10 180 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 ST6GALNAC6Q969X2 333 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 SSX3Q99909 188 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 AGMATQ9BSE5 352 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 IFI27L2Q9H2X8 130 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 PIPOXQ9P0Z9 390 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 KLK11Q9UBX7 282 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 MTFP1Q9UDX5 166 aa12.05□□□□□ -0.48
SUMO1-203ENST00000392246 VGLL3A8MV65 326 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 HSD17B6O14756 317 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 RAB29O14966 203 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 GAPDHP04406 335 aaKnown RBP12.04□□□□□ -0.48
SUMO1-203ENST00000392246 PTBP1P26599 531 aaKnown RBP eCLIP12.04□□□□□ -0.48
SUMO1-203ENST00000392246 ETV6P41212 452 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 OR3A3P47888 321 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 DGCR2P98153 550 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 SSBP1Q04837 148 aaKnown RBP12.04□□□□□ -0.48
SUMO1-203ENST00000392246 PLA1AQ53H76 456 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 LYSMD2Q8IV50 215 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 ODF3L1Q8IXM7 274 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 TMEM86BQ8N661 226 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 OR5H2Q8NGV7 314 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 FAM216AQ8WUB2 273 aa12.04□□□□□ -0.48
SUMO1-203ENST00000392246 SMIM4Q8WVI0 70 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms