RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 PLA2G3Q9NZ20 509 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 DICER1Q9UPY3 1922 aaKnown RBP14.07□□□□□ -0.16
SHANK1-204ENST00000391814 ARID1BQ8NFD5 2236 aaPredicted RBP14.07□□□□□ -0.16
SHANK1-204ENST00000391814 PPIHO43447 177 aaKnown RBP14.07□□□□□ -0.16
SHANK1-204ENST00000391814 SNAI2O43623 268 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 BIVMQ86UB2 503 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 VSTM2LQ96N03 204 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 FAM222BQ8WU58 562 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 CCL17Q92583 94 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 NHSQ6T4R5 1651 aa14.07□□□□□ -0.16
SHANK1-204ENST00000391814 DPRXA6NFQ7 191 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 CCR5P51681 352 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 PPP1CAP62136 330 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 HOXA4Q00056 320 aaPredicted RBP14.06□□□□□ -0.16
SHANK1-204ENST00000391814 KRTCAP3Q53RY4 240 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 LIPT2A6NK58 231 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 ZNF324O75467 553 aaPredicted RBP14.06□□□□□ -0.16
SHANK1-204ENST00000391814 OR2A4O95047 310 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 CD1AP06126 327 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 OR2A7Q96R45 310 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 QTRT1Q9BXR0 403 aaKnown RBP14.06□□□□□ -0.16
SHANK1-204ENST00000391814 RNF122Q9H9V4 155 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 TINAGQ9UJW2 476 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 HIKESHIQ53FT3 197 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 DERL1Q9BUN8 251 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 BMI1P35226 326 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 ITGB4P16144 1822 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 IGHV3OR15-7A0A075B7D8 119 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 LYZL6O75951 148 aa14.06□□□□□ -0.16
SHANK1-204ENST00000391814 IGHV5-51A0A0C4DH38 117 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 HOXA5P20719 270 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 CBLN1P23435 193 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 RTP5Q14D33 572 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 SLC36A1Q7Z2H8 476 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 VN1R4Q7Z5H5 301 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 HIGD1AQ9Y241 93 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 PLAURQ03405 335 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 SPANXN1Q5VSR9 72 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 C5orf66Q9H5L9 145 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 TMEM210A6NLX4 147 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 H0Y980 276 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 CA1P00915 261 aaPredicted RBP14.05□□□□□ -0.16
SHANK1-204ENST00000391814 CKS2P33552 79 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 SRSF3P84103 164 aaKnown RBP14.05□□□□□ -0.16
SHANK1-204ENST00000391814 TNFAIP6P98066 277 aaPredicted RBP14.05□□□□□ -0.16
SHANK1-204ENST00000391814 LAIR2Q6ISS4 152 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 PRNDQ9UKY0 176 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 LOXL2Q9Y4K0 774 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 LRP5O75197 1615 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 TNFSF15O95150 251 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 RBM11P57052 281 aaKnown RBP14.05□□□□□ -0.16
SHANK1-204ENST00000391814 KLF3P57682 345 aaPredicted RBP14.05□□□□□ -0.16
SHANK1-204ENST00000391814 TAF15Q92804 592 aaKnown RBP eCLIP14.05□□□□□ -0.16
SHANK1-204ENST00000391814 SARAFQ96BY9 339 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 SMOC1Q9H4F8 434 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 CLDN16Q9Y5I7 305 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 PSG6Q00889 435 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 RNPS1Q15287 305 aaKnown RBP14.05□□□□□ -0.16
SHANK1-204ENST00000391814 GPHA2Q96T91 129 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 CHST5Q9GZS9 411 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 TMEM222Q9H0R3 208 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 MPC1Q9Y5U8 109 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 SLX4Q8IY92 1834 aa14.05□□□□□ -0.16
SHANK1-204ENST00000391814 GDF9O60383 454 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 TMEM45BQ96B21 275 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 GABRG3Q99928 467 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 TRBV5-5A0A0J9YX44 114 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 A0A1W2PPE3 182 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 ZNF488Q96MN9 340 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 TOX2Q96NM4 488 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 ARRDC1-AS1Q9H2J1 176 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 UBTD1Q9HAC8 227 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 AMMECR1Q9Y4X0 333 aaPredicted RBP14.04□□□□□ -0.16
SHANK1-204ENST00000391814 A8MWL6 223 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 CDIPTO14735 213 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 GNG7O60262 68 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 ISG15P05161 165 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 OR2H1Q9GZK4 316 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 FAM90A27PA6NNH2 459 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 MAS1LP35410 378 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 MIC13Q5XKP0 118 aa14.04□□□□□ -0.16
SHANK1-204ENST00000391814 A0A1W2PP11 408 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 A1L4Q6 167 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 TNFRSF1AP19438 455 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 IL11P20809 199 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 FUT5Q11128 374 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 GFRALQ6UXV0 394 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 LINC00596Q86U02 117 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 GRAMD2BQ96HH9 432 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 IMMP2LQ96T52 175 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 SF3B6Q9Y3B4 125 aaKnown RBP14.03□□□□□ -0.16
SHANK1-204ENST00000391814 LSM6P62312 80 aaKnown RBP14.03□□□□□ -0.16
SHANK1-204ENST00000391814 C10orf126Q8N4M7 172 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 Q8WTZ3 238 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 SERGEFQ9UGK8 458 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 TBL2Q9Y4P3 447 aaKnown RBP14.03□□□□□ -0.16
SHANK1-204ENST00000391814 ANKRD31Q8N7Z5 1873 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 TSPAN2O60636 221 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 IL4P05112 153 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 COX6CP09669 75 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms