RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CYB561D1Q8N8Q1 229 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 OR10S1Q8NGN2 331 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 CT55Q8WUE5 264 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 GALNT14Q96FL9 552 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 METTL1Q9UBP6 276 aaKnown RBP5.13□□□□□ -1.59
RFX3-204ENST00000382004 UQCR10Q9UDW1 63 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 PTPRZ1P23471 2315 aaPredicted RBP5.13□□□□□ -1.59
RFX3-204ENST00000382004 TMEM210A6NLX4 147 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 ERGP11308 486 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 PRICKLE4Q2TBC4 344 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 TMEM177Q53S58 311 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 C10orf128Q5T292 105 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 PQLC2Q6ZP29 291 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 FGF14Q92915 247 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 LRRC3BQ96PB8 259 aa5.13□□□□□ -1.59
RFX3-204ENST00000382004 TRBV7-9A0A0J9YWB2 115 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 PF4P02776 101 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 ATP6V0CP27449 155 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 MGAT2Q10469 447 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 LY6EQ16553 131 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 TMEM240Q5SV17 173 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 RSPO2Q6UXX9 243 aaPredicted RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 BIVMQ86UB2 503 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 SRSF12Q8WXF0 261 aaKnown RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 PGLYRP3Q96LB9 341 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 TRAV12-3A0A0B4J271 114 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 A0A1B0GV72 72 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 TRGC2P03986 189 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 FAM106CPP0CH98 169 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 CXCL3P19876 107 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 PCP4P48539 62 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 DEGS2Q6QHC5 323 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 FRRS1LQ9P0K9 344 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 SPTY2D1-AS1A0A0U1RR47 76 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 C9JCJ5 164 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 PITX3O75364 302 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 FOLR2P14207 255 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 HTN3P15516 51 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 TRA2AQ13595 282 aaKnown RBP eCLIP5.12□□□□□ -1.59
RFX3-204ENST00000382004 PMCHL1Q16048 86 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 NFAM1Q8NET5 270 aaPredicted RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 ALKBH7Q9BT30 221 aaPredicted RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 PDFQ9HBH1 243 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 AKAP12Q02952 1782 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 hCG_38984A0A1B0GV85 526 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 K7N7A8 449 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 AMY1AP04745 511 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 ADRA2AP08913 450 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 LINC00869P0C866 280 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 RPL27AP46776 148 aaKnown RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 RAG2P55895 527 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 MEF2CQ06413 473 aaPredicted RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 STPG3Q8N7X2 389 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 ST6GALNAC3Q8NDV1 305 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 MARVELD1Q9BSK0 173 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 APC2O95996 2303 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 TRAV8-6A0A0B4J262 113 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 HLA-DRB1P01911 266 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 GPR6P46095 362 aaPredicted RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 PGFP49763 221 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 MMP16P51512 607 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 TEX30Q5JUR7 227 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 FAM219BQ5XKK7 198 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 CADM4Q8NFZ8 388 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 OR10AG1Q8NH19 301 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 OR6X1Q8NH79 312 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 LHFPL5Q8TAF8 219 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 MARVELD3Q96A59 401 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 ZG16BQ96DA0 208 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 WFIKKN1Q96NZ8 548 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 KIR2DL4Q99706 377 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 MS4A5Q9H3V2 200 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 RBKSQ9H477 322 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 NPVFQ9HCQ7 196 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 MIA3Q5JRA6 1907 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 SPTBP11277 2137 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 NKX2-2O95096 273 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 FGF9P31371 208 aaPredicted RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 KIAA1644Q3SXP7 199 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 UNQ5815/PRO19632Q6UWF5 114 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 AMER3Q8N944 861 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 OR5AN1Q8NGI8 311 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 LINC00615Q96LM1 132 aaPredicted RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 ZNF714Q96N38 554 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 HIST1H1AQ02539 215 aaPredicted RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 ACVR1Q04771 509 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 CYB5R2Q6BCY4 276 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 APOBEC4Q8WW27 367 aaKnown RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 DCTN5Q9BTE1 182 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 TDRD6O60522 2096 aaKnown RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 RAE1P78406 368 aaKnown RBP5.12□□□□□ -1.59
RFX3-204ENST00000382004 DIRC2Q96SL1 478 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 C2orf88Q9BSF0 95 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 SLC6A13Q9NSD5 602 aa5.12□□□□□ -1.59
RFX3-204ENST00000382004 UBR2Q8IWV8 1755 aa5.11□□□□□ -1.59
RFX3-204ENST00000382004 IGKV3D-20A0A0C4DH25 116 aa5.11□□□□□ -1.59
RFX3-204ENST00000382004 COX6B1P14854 86 aa5.11□□□□□ -1.59
RFX3-204ENST00000382004 EPHA8P29322 1005 aaPredicted RBP5.11□□□□□ -1.59
RFX3-204ENST00000382004 TPRX1Q8N7U7 411 aa5.11□□□□□ -1.59
RFX3-204ENST00000382004 OR5A1Q8NGJ0 315 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms