RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 TMEM140Q9NV12 185 aa12.18□□□□□ -0.46
SNPH-201ENST00000381867 THSD7BQ9C0I4 1608 aa12.18□□□□□ -0.46
SNPH-201ENST00000381867 RLFQ13129 1914 aa12.18□□□□□ -0.46
SNPH-201ENST00000381867 GAGE10A6NGK3 116 aa12.18□□□□□ -0.46
SNPH-201ENST00000381867 J3QT63 122 aa12.18□□□□□ -0.46
SNPH-201ENST00000381867 HOXD4P09016 255 aaPredicted RBP12.18□□□□□ -0.46
SNPH-201ENST00000381867 NPY1RP25929 384 aa12.18□□□□□ -0.46
SNPH-201ENST00000381867 GPA33Q99795 319 aa12.18□□□□□ -0.46
SNPH-201ENST00000381867 UBTD1Q9HAC8 227 aa12.18□□□□□ -0.46
SNPH-201ENST00000381867 HIST1H1BP16401 226 aaKnown RBP12.17□□□□□ -0.46
SNPH-201ENST00000381867 GZMHP20718 246 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 MGAT2Q10469 447 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 ZNF788Q6ZQV5 615 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 IL19Q9UHD0 177 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 SIRT4Q9Y6E7 314 aaPredicted RBP12.17□□□□□ -0.46
SNPH-201ENST00000381867 KCNAB3O43448 404 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 ZNF137PP52743 207 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 CLDN18P56856 261 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 CSRP2Q16527 193 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 PLPPR5Q32ZL2 321 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 OR4C46A6NHA9 309 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 FGF11Q92914 225 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 GMPPAQ96IJ6 420 aaPredicted RBP12.17□□□□□ -0.46
SNPH-201ENST00000381867 LNP1A1A4G5 178 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 GNG7O60262 68 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 OR4A8P0C604 315 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 RASL11BQ9BPW5 248 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 PATJQ8NI35 1801 aa12.17□□□□□ -0.46
SNPH-201ENST00000381867 HINT1P49773 126 aaPredicted RBP12.16□□□□□ -0.46
SNPH-201ENST00000381867 PMCHL1Q16048 86 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 PIPOXQ9P0Z9 390 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 TUBD1Q9UJT1 453 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 NMUP48645 174 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 NANOS3P60323 173 aaKnown RBP12.16□□□□□ -0.46
SNPH-201ENST00000381867 C12orf54Q6X4T0 127 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 RHOVQ96L33 236 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 PGLYRP3Q96LB9 341 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 OR2H1Q9GZK4 316 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 UQCR10Q9UDW1 63 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 MRPS18BQ9Y676 258 aaKnown RBP12.16□□□□□ -0.46
SNPH-201ENST00000381867 FBLL1A6NHQ2 334 aaKnown RBP12.16□□□□□ -0.46
SNPH-201ENST00000381867 NAT2P11245 290 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 KIR3DL2P43630 455 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 RUNX1Q01196 453 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 SNRNP40Q96DI7 357 aaKnown RBP12.16□□□□□ -0.46
SNPH-201ENST00000381867 DMRT1Q9Y5R6 373 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 DNASE2O00115 360 aaPredicted RBP12.16□□□□□ -0.46
SNPH-201ENST00000381867 HLA-DQB1P01920 261 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 FSTP19883 344 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 MFAP2P55001 183 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 BHLHA15Q7RTS1 189 aaPredicted RBP12.16□□□□□ -0.46
SNPH-201ENST00000381867 GBGT1Q8N5D6 347 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 ZNF721Q8TF20 911 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 GPR61Q9BZJ8 451 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 RNF122Q9H9V4 155 aa12.16□□□□□ -0.46
SNPH-201ENST00000381867 PTP4A3O75365 173 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 FABP2P12104 132 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 GAB4Q2WGN9 574 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 NPTNQ9Y639 398 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 SIGLEC5O15389 551 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 PLP1P60201 277 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 TXNDC17Q9BRA2 123 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 PARD6GQ9BYG4 376 aaPredicted RBP12.15□□□□□ -0.46
SNPH-201ENST00000381867 TRAV38-1A0A0B4J264 116 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 ZSWIM8A7E2V4 1837 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 CDIPTO14735 213 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 EIF3GO75821 320 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNPH-201ENST00000381867 CEBPDP49716 269 aaPredicted RBP12.15□□□□□ -0.46
SNPH-201ENST00000381867 COMPP49747 757 aaPredicted RBP12.15□□□□□ -0.46
SNPH-201ENST00000381867 ZAR1Q86SH2 424 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 ABHD3Q8WU67 409 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 HDHD3Q9BSH5 251 aaPredicted RBP12.15□□□□□ -0.46
SNPH-201ENST00000381867 ASCL3Q9NQ33 180 aa12.15□□□□□ -0.46
SNPH-201ENST00000381867 CRXO43186 299 aaPredicted RBP12.15□□□□□ -0.47
SNPH-201ENST00000381867 FCGR3AP08637 254 aa12.15□□□□□ -0.47
SNPH-201ENST00000381867 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.47
SNPH-201ENST00000381867 CLN8Q9UBY8 286 aa12.15□□□□□ -0.47
SNPH-201ENST00000381867 ZNF256Q9Y2P7 627 aaPredicted RBP12.15□□□□□ -0.47
SNPH-201ENST00000381867 M0R3E3 92 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 CD1BP29016 333 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 TMEM252Q8N6L7 170 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 PCGF1Q9BSM1 259 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 CXorf65A6NEN9 183 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 CFDP00746 253 aaPredicted RBP12.14□□□□□ -0.47
SNPH-201ENST00000381867 RNF224P0DH78 156 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 MAGEA5P43359 124 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 C3AR1Q16581 482 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 Q8WTZ3 238 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 FBLIM1Q8WUP2 373 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 KLHDC2Q9Y2U9 406 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 A0A1W2PRD5 423 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 A0A1W2PRF3 423 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 A0A1W2PRM7 423 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 A6NJY4 79 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 MPTX1A8MV57 137 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 SYNGR1O43759 233 aa12.14□□□□□ -0.47
SNPH-201ENST00000381867 CDX1P47902 265 aaPredicted RBP12.14□□□□□ -0.47
SNPH-201ENST00000381867 LGALS7P47929 136 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms