RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CA6P23280 308 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 S100A2P29034 98 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 IL24Q13007 206 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 ZNF324BQ6AW86 544 aaPredicted RBP13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 ABHD5Q8WTS1 349 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 SPENQ96T58 3664 aaKnown RBP13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 TRGV5A0A0B4J1U4 118 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 KIR2DS1A0A191URI9 304 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 CEACAM1P13688 526 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 KIR2DS4P43632 304 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 IDH3GP51553 393 aaPredicted RBP13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 KIR2DS1Q14954 304 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 HAPLN4Q86UW8 402 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 CNEP1R1Q8N9A8 125 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 RHOVQ96L33 236 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 PFDN5Q99471 154 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 LYZL6O75951 148 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 APLNRP35414 380 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 CLN3Q13286 438 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 ZNF787Q6DD87 383 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 ZNF880Q6PDB4 577 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 RBMXL1Q96E39 390 aaKnown RBP13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 CACNA1DQ01668 2161 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 CELA3BP08861 270 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 ELLP55199 621 aaPredicted RBP13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 KHDC3LQ587J8 217 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 BEND4Q6ZU67 534 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 MKXQ8IYA7 352 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 OR10J5Q8NHC4 309 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 SPRR3Q9UBC9 169 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 OR2W1Q9Y3N9 320 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 CD300LBA8K4G0 201 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 HMGB3O15347 200 aaKnown RBP13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 IGLV2-14P01704 120 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 TRGC1P0CF51 173 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 SLC35E3Q7Z769 313 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 ABHD14BQ96IU4 210 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 DMRT1Q9Y5R6 373 aa13.78□□□□□ -0.2
NKX3-1-201ENST00000380871 GTF3C1Q12789 2109 aa13.77□□□□□ -0.2
NKX3-1-201ENST00000380871 CNOT4O95628 575 aaKnown RBP13.77□□□□□ -0.2
NKX3-1-201ENST00000380871 IFNA5P01569 189 aa13.77□□□□□ -0.2
NKX3-1-201ENST00000380871 CD55P08174 381 aa13.77□□□□□ -0.2
NKX3-1-201ENST00000380871 SOX8P57073 446 aa13.77□□□□□ -0.2
NKX3-1-201ENST00000380871 MRPS18CQ9Y3D5 142 aaKnown RBP13.77□□□□□ -0.2
NKX3-1-201ENST00000380871 FAM90A10PA6NDY2 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A18PA6NE21 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A16PA6NEW6 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A20PA6NIJ5 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A8PA6NJQ4 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A7PA6NKC0 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A22PA8MWA6 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A12PA8MX19 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A5PA8MXJ8 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A23PA8MXZ1 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 IGKV1-5P01602 117 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A15PP0C7V4 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A13PP0C7W8 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A14PP0C7W9 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM90A24PP0C7X0 464 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 MMP9P14780 707 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 ERVS71-1P61550 626 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 HOXA4Q00056 320 aaPredicted RBP13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 MDP1Q86V88 176 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 TMEM45BQ96B21 275 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 RCC1LQ96I51 464 aaKnown RBP13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM210BQ96KR6 192 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 BCL2P10415 239 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 FABP4P15090 132 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 NKX6-1P78426 367 aaPredicted RBP13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 HIST3H2BBQ8N257 126 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 BOD1L1Q8NFC6 3051 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 APOBEC3DQ96AK3 386 aaPredicted RBP13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 OR14J1Q9UGF5 321 aa13.77□□□□□ -0.21
NKX3-1-201ENST00000380871 IGKV3D-15A0A087WSY6 115 aa13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 DUXBA0A1W2PPF3 345 aa13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 HBE1P02100 147 aa13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 SNIP1Q8TAD8 396 aaKnown RBP13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 PLK3Q9H4B4 646 aa13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 DOCK11Q5JSL3 2073 aa13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 FAM53AQ6NSI3 398 aaPredicted RBP13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 H1FOOQ8IZA3 346 aaPredicted RBP13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 SNX22Q96L94 193 aa13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 TRIB1Q96RU8 372 aa13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 PRDM13Q9H4Q3 707 aa13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 KCNS2Q9ULS6 477 aa13.76□□□□□ -0.21
NKX3-1-201ENST00000380871 PPP1R2P9O14990 202 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 PGA5P0DJD9 388 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 ZNF525Q8N782 197 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 CA5BP1Q8WTZ4 195 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 DLL3Q9NYJ7 618 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 PSENENQ9NZ42 101 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 CFAP47Q6ZTR5 3102 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 ANKRD30BLA7E2S9 258 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 CEBPZOSA8MTT3 80 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 DFFBO76075 338 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 WNT5AP41221 380 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 SPANXN5Q5MJ07 72 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 UNQ6494/PRO21346Q6UXR6 183 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 FDCSPQ8NFU4 85 aa13.75□□□□□ -0.21
NKX3-1-201ENST00000380871 RBKSQ9H477 322 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms