RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 OR11H4Q8NGC9 324 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 MRAPQ8TCY5 172 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 CT55Q8WUE5 264 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 RND1Q92730 232 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 IP6K3Q96PC2 410 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 MAP1LC3AQ9H492 121 aa9.46□□□□□ -0.89
CLCN4-202ENST00000380833 IGHV5-51A0A0C4DH38 117 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 A0A1W2PPE3 182 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 HMGA1P17096 107 aaKnown RBP9.46□□□□□ -0.9
CLCN4-202ENST00000380833 AGAP20933 346 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 FCRL6Q6DN72 434 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 ALKAL1Q6UXT8 129 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 OSR2Q8N2R0 312 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 PNKDQ8N490 385 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 ST6GALNAC6Q969X2 333 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 CISD1Q9NZ45 108 aaKnown RBP9.46□□□□□ -0.9
CLCN4-202ENST00000380833 PRRC2BQ5JSZ5 2229 aaKnown RBP9.46□□□□□ -0.9
CLCN4-202ENST00000380833 TRAV5A0A0B4J249 113 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 PMVKQ15126 192 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 MORN4Q8NDC4 146 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 SH2D2AQ9NP31 389 aa9.46□□□□□ -0.9
CLCN4-202ENST00000380833 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.45□□□□□ -0.9
CLCN4-202ENST00000380833 MAGEA5P43359 124 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 UCP3P55916 312 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 SELENOTP62341 195 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 LY6EQ16553 131 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 OR4X2Q8NGF9 303 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 PDLIM5Q96HC4 596 aaKnown RBP9.45□□□□□ -0.9
CLCN4-202ENST00000380833 RASL11BQ9BPW5 248 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 C4BP0C0L5 1744 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 ATP6V0CP27449 155 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 SAMD5Q5TGI4 173 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 HILPDAQ9Y5L2 63 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 PIK3C2AO00443 1686 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 MFAP2P55001 183 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 DSCR4P56555 118 aaPredicted RBP9.45□□□□□ -0.9
CLCN4-202ENST00000380833 PSMG4Q5JS54 123 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 LIAT1Q6ZQX7 453 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 PRSS41Q7RTY9 318 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 TMEM144Q7Z5S9 345 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 LSM10Q969L4 123 aaKnown RBP9.45□□□□□ -0.9
CLCN4-202ENST00000380833 PRDM13Q9H4Q3 707 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 MRPS18BQ9Y676 258 aaKnown RBP9.45□□□□□ -0.9
CLCN4-202ENST00000380833 TMSB15BA0A087X1C1 80 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 PRSS37A4D1T9 235 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 A8MWV9 139 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 LGALS7P47929 136 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 CHTOPQ9Y3Y2 248 aaKnown RBP9.45□□□□□ -0.9
CLCN4-202ENST00000380833 CDIPTO14735 213 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 CCL4P13236 92 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 EFNB1P98172 346 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 ZNF841Q6ZN19 808 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 OR4F17Q8NGA8 305 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 OR8B2Q96RD0 313 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 ST20Q9HBF5 79 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 IL36GQ9NZH8 169 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 RBFOX2O43251 390 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLCN4-202ENST00000380833 KBTBD11O94819 623 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 CXorf1O96002 111 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 NGFP01138 241 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 TMEM56Q96MV1 263 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 WDR54Q9H977 334 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 KCNE3Q9Y6H6 103 aa9.45□□□□□ -0.9
CLCN4-202ENST00000380833 SP1P08047 785 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 NPSP0C0P6 89 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 OR10D3Q8NH80 312 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 WNT16Q9UBV4 365 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 TRAV8-7A0A075B6U6 113 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 KLF4O43474 513 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 ANKRD34CP0C6C1 535 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 LPAR6P43657 344 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 ZNF137PP52743 207 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 Q5BKY6 102 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 CALHM3Q86XJ0 350 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 HIST3H2BBQ8N257 126 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 ZG16BQ96DA0 208 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 NRTNQ99748 197 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 MAS1LP35410 378 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 NOXO1Q8NFA2 376 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 PELI1Q96FA3 418 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 BEX4Q9NWD9 120 aaPredicted RBP9.44□□□□□ -0.9
CLCN4-202ENST00000380833 SELLP14151 372 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 TMEM177Q53S58 311 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 TMEM92Q6UXU6 159 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 MOGAT3Q86VF5 341 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 FADS6Q8N9I5 356 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 HIST1H2BLQ99880 126 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 AURKAIP1Q9NWT8 199 aaPredicted RBP9.44□□□□□ -0.9
CLCN4-202ENST00000380833 LCN2P80188 198 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 EMC4Q5J8M3 183 aa9.44□□□□□ -0.9
CLCN4-202ENST00000380833 EREGO14944 169 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 UMODP07911 640 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 R4GMQ9 66 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 LOC105371242A0A075B767 164 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 PPIAL4CA0A0B4J2A2 164 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 PGPEP1LA6NFU8 196 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 PPIAL4GP0DN37 164 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 UNQ5815/PRO19632Q6UWF5 114 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 TBC1D26Q86UD7 250 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms