RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 DAPL1A0PJW8 107 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 MAGEB3O15480 346 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 TFAP2AP05549 437 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 RCC1P18754 421 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-203ENST00000380748 RAB3AP20336 220 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 SERPINA2P20848 420 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 PPP1CCP36873 323 aaKnown RBP13.09□□□□□ -0.31
HMGN1-203ENST00000380748 MPV17LQ2QL34 196 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 C6orf183Q5T699 404 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 ZNF529Q6P280 563 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 ZNF833PQ6ZTB9 187 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 C5orf24Q7Z6I8 188 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 LINC00596Q86U02 117 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 C4orf36Q96KX1 117 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 CLCC1Q96S66 551 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 METTL9Q9H1A3 318 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 RAB9BQ9NP90 201 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 ZNF355PQ9NSJ1 428 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 ZNF446Q9NWS9 450 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 SIGLEC8Q9NYZ4 499 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 IL36GQ9NZH8 169 aa13.09□□□□□ -0.31
HMGN1-203ENST00000380748 SAA2-SAA4A0A096LPE2 208 aa13.08□□□□□ -0.32
HMGN1-203ENST00000380748 A0A1W2PP11 408 aa13.08□□□□□ -0.32
HMGN1-203ENST00000380748 TRBV12-3P01733 135 aa13.08□□□□□ -0.32
HMGN1-203ENST00000380748 SAA2P0DJI9 122 aaPredicted RBP13.08□□□□□ -0.32
HMGN1-203ENST00000380748 HOXB6P17509 224 aaKnown RBP13.08□□□□□ -0.32
HMGN1-203ENST00000380748 MECP2P51608 486 aaKnown RBP13.08□□□□□ -0.32
HMGN1-203ENST00000380748 DEFA5Q01523 94 aa13.08□□□□□ -0.32
HMGN1-203ENST00000380748 EWSR1Q01844 656 aaKnown RBP eCLIP13.08□□□□□ -0.32
HMGN1-203ENST00000380748 TMED1Q13445 227 aa13.08□□□□□ -0.32
HMGN1-203ENST00000380748 DYRK1AQ13627 763 aa13.08□□□□□ -0.32
HMGN1-203ENST00000380748 CEMP1Q6PRD7 247 aaPredicted RBP13.08□□□□□ -0.32
HMGN1-203ENST00000380748 SPATA24Q86W54 205 aa13.08□□□□□ -0.32
HMGN1-203ENST00000380748 TSEN15Q8WW01 171 aaKnown RBP13.08□□□□□ -0.32
HMGN1-203ENST00000380748 TAS2R4Q9NYW5 299 aa13.08□□□□□ -0.32
HMGN1-203ENST00000380748 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.32
HMGN1-203ENST00000380748 J3QRE1 110 aa13.07□□□□□ -0.32
HMGN1-203ENST00000380748 DCTN3O75935 186 aa13.07□□□□□ -0.32
HMGN1-203ENST00000380748 POLR2IP36954 125 aaKnown RBP13.07□□□□□ -0.32
HMGN1-203ENST00000380748 ALDH3A2P51648 485 aa13.07□□□□□ -0.32
HMGN1-203ENST00000380748 RFKQ969G6 155 aa13.07□□□□□ -0.32
HMGN1-203ENST00000380748 MRPS24Q96EL2 167 aaKnown RBP13.07□□□□□ -0.32
HMGN1-203ENST00000380748 CYYR1Q96J86 154 aa13.07□□□□□ -0.32
HMGN1-203ENST00000380748 PDCD1LG2Q9BQ51 273 aa13.07□□□□□ -0.32
HMGN1-203ENST00000380748 OVOL2Q9BRP0 275 aa13.07□□□□□ -0.32
HMGN1-203ENST00000380748 TAF9BQ9HBM6 251 aa13.07□□□□□ -0.32
HMGN1-203ENST00000380748 SLC2A8Q9NY64 477 aa13.07□□□□□ -0.32
HMGN1-203ENST00000380748 SLC23A1Q9UHI7 598 aa13.07□□□□□ -0.32
HMGN1-203ENST00000380748 ZNF785A8K8V0 405 aa13.06□□□□□ -0.32
HMGN1-203ENST00000380748 OR11H12B2RN74 326 aa13.06□□□□□ -0.32
HMGN1-203ENST00000380748 CA2P00918 260 aa13.06□□□□□ -0.32
HMGN1-203ENST00000380748 MOGAT2Q3SYC2 334 aa13.06□□□□□ -0.32
HMGN1-203ENST00000380748 CD300EQ496F6 205 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-203ENST00000380748 KDM4DQ6B0I6 523 aa13.06□□□□□ -0.32
HMGN1-203ENST00000380748 POC5Q8NA72 575 aa13.06□□□□□ -0.32
HMGN1-203ENST00000380748 OR8J1Q8NGP2 316 aa13.06□□□□□ -0.32
HMGN1-203ENST00000380748 OR2K2Q8NGT1 345 aa13.06□□□□□ -0.32
HMGN1-203ENST00000380748 NSL1Q96IY1 281 aa13.06□□□□□ -0.32
HMGN1-203ENST00000380748 RIBC2Q9H4K1 309 aa13.06□□□□□ -0.32
HMGN1-203ENST00000380748 RCC2Q9P258 522 aaKnown RBP13.06□□□□□ -0.32
HMGN1-203ENST00000380748 PKHD1P08F94 4074 aa13.05□□□□□ -0.32
HMGN1-203ENST00000380748 A0A0G2JLM5 398 aa13.05□□□□□ -0.32
HMGN1-203ENST00000380748 FADS2O95864 444 aaKnown RBP13.05□□□□□ -0.32
HMGN1-203ENST00000380748 SOX2P48431 317 aa13.05□□□□□ -0.32
HMGN1-203ENST00000380748 ZNF562Q6V9R5 426 aa13.05□□□□□ -0.32
HMGN1-203ENST00000380748 GLDNQ6ZMI3 551 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-203ENST00000380748 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
HMGN1-203ENST00000380748 GAPTQ8N292 157 aa13.05□□□□□ -0.32
HMGN1-203ENST00000380748 OR5T1Q8NG75 326 aa13.05□□□□□ -0.32
HMGN1-203ENST00000380748 GRPEL2Q8TAA5 225 aa13.05□□□□□ -0.32
HMGN1-203ENST00000380748 PEF1Q9UBV8 284 aaKnown RBP13.05□□□□□ -0.32
HMGN1-203ENST00000380748 JPT1Q9UK76 154 aa13.05□□□□□ -0.32
HMGN1-203ENST00000380748 DNAH6Q9C0G6 4158 aa13.05□□□□□ -0.32
HMGN1-203ENST00000380748 A0A0J9YWU9 116 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 TCRBV3S1A0A5B6 114 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 TMEM212A6NML5 194 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 MCRIP1C9JLW8 97 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 E9PI62 339 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 SLC22A6Q4U2R8 563 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 HSP90B2PQ58FF3 399 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 TRAT1Q6PIZ9 186 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 OR5AK2Q8NH90 309 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 CIB1Q99828 191 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 THTPAQ9BU02 230 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 IFI27L2Q9H2X8 130 aa13.04□□□□□ -0.32
HMGN1-203ENST00000380748 ISG20L2Q9H9L3 353 aaKnown RBP13.04□□□□□ -0.32
HMGN1-203ENST00000380748 METTL1Q9UBP6 276 aaKnown RBP13.04□□□□□ -0.32
HMGN1-203ENST00000380748 H3BUA1 57 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 OR2A4O95047 310 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 GSTP1P09211 210 aaKnown RBP13.03□□□□□ -0.32
HMGN1-203ENST00000380748 CT45A6P0DMU7 189 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 CT45A5P0DMU8 189 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 CT45A7P0DMV0 189 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 GTF2F2P13984 249 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 TATDN3Q17R31 274 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 RPEL1Q2QD12 228 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 RPL39P5Q59GN2 51 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 DDI2Q5TDH0 399 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 RAB12Q6IQ22 244 aa13.03□□□□□ -0.32
HMGN1-203ENST00000380748 S100A13Q99584 98 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms