RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 MEGF10Q96KG7 1140 aa10.65□□□□□ -0.7
VPS16-202ENST00000380445 OR1A1Q9P1Q5 309 aa10.65□□□□□ -0.7
VPS16-202ENST00000380445 C3orf80F5H4A9 247 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 TIMP3P35625 211 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 F2RL1P55085 397 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 BPIFB3P59826 476 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 ID3Q02535 119 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 C3orf36Q3SXR2 165 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 C1orf185Q5T7R7 199 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 ACP7Q6ZNF0 438 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 ASCL5Q7RTU5 278 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 GINS3Q9BRX5 216 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 SEC11CQ9BY50 192 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 PLEKHF2Q9H8W4 249 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 TREM1Q9NP99 234 aa10.65□□□□□ -0.71
VPS16-202ENST00000380445 ZNF292O60281 2723 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 IGHV3-64DA0A0J9YX35 117 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 IFNL4K9M1U5 179 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 RAB5CP51148 216 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 CAV2P51636 162 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 ZNF266Q14584 549 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 TESK1Q15569 626 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 SMIM21Q3B7S5 101 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 WDR82Q6UXN9 313 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 ZDHHC8Q9ULC8 765 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 A0A1B0GU03 582 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 OOEPA6NGQ2 149 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 RNF212BA8MTL3 300 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 NQO2P16083 231 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 CEACAM6P40199 344 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 CD200P41217 278 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 LPAR6P43657 344 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 SRSF3P84103 164 aaKnown RBP10.64□□□□□ -0.71
VPS16-202ENST00000380445 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.71
VPS16-202ENST00000380445 OR51H1Q8NH63 302 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 GALMQ96C23 342 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 GPHA2Q96T91 129 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 EGLN1Q9GZT9 426 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 C11orf1Q9H5F2 150 aa10.64□□□□□ -0.71
VPS16-202ENST00000380445 LYRM2Q9NU23 88 aaPredicted RBP10.64□□□□□ -0.71
VPS16-202ENST00000380445 LIN7CQ9NUP9 197 aaKnown RBP10.64□□□□□ -0.71
VPS16-202ENST00000380445 NHLH2Q02577 135 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 Q6ZR03 302 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 ZNF826PQ6ZT77 177 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 RBMXL3Q8N7X1 1067 aaKnown RBP10.63□□□□□ -0.71
VPS16-202ENST00000380445 C15orf54Q8N8G6 183 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 RNASE11Q8TAA1 199 aaKnown RBP10.63□□□□□ -0.71
VPS16-202ENST00000380445 LSM10Q969L4 123 aaKnown RBP10.63□□□□□ -0.71
VPS16-202ENST00000380445 MUCL1Q96DR8 90 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 C14orf79Q96F83 325 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 MSL2Q9HCI7 577 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 SMCO4Q9NRQ5 59 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 UQCC1Q9NVA1 299 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 TRAV39A0A0B4J263 110 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 SSSCA1O60232 199 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 PSPNO60542 156 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 OR8U8P0C7N1 319 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 BAXQ07812 192 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 CLEC9AQ6UXN8 241 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 Q6ZRG5 221 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 ZBTB34Q8NCN2 500 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 SFXN3Q9BWM7 321 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 KCNS2Q9ULS6 477 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 FZR1Q9UM11 496 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 FAM215AQ9Y5M1 114 aa10.63□□□□□ -0.71
VPS16-202ENST00000380445 CNOT1A5YKK6 2376 aaKnown RBP10.62□□□□□ -0.71
VPS16-202ENST00000380445 MKRN2OSH3BPM6 223 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 IGHV2-5P01817 119 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 CRYAAP02489 173 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 PSG2P11465 335 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 AGAP20933 346 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 IL2RGP31785 369 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 CXorf66Q5JRM2 361 aaPredicted RBP10.62□□□□□ -0.71
VPS16-202ENST00000380445 PRAMEF6Q5VXH4 476 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 BTNL8Q6UX41 500 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 TMEM231Q9H6L2 316 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 LUZP4Q9P127 313 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 WASF3Q9UPY6 502 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 FAM24AA6NFZ4 105 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 WNT9BO14905 357 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 PITX3O75364 302 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 OR8U9P0C7N5 309 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 DANCRP0C864 163 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 FAM180AQ6UWF9 173 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 TMEM252Q8N6L7 170 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 OR8U1Q8NH10 309 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 NINJ1Q92982 152 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 BSCL2Q96G97 398 aaPredicted RBP10.62□□□□□ -0.71
VPS16-202ENST00000380445 TOLLIPQ9H0E2 274 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 WFDC1Q9HC57 220 aa10.62□□□□□ -0.71
VPS16-202ENST00000380445 STRAPQ9Y3F4 350 aaKnown RBP10.62□□□□□ -0.71
VPS16-202ENST00000380445 PTPRZ1P23471 2315 aaPredicted RBP10.62□□□□□ -0.71
VPS16-202ENST00000380445 GVINP1Q7Z2Y8 2422 aa10.61□□□□□ -0.71
VPS16-202ENST00000380445 CEBPDP49716 269 aaPredicted RBP10.61□□□□□ -0.71
VPS16-202ENST00000380445 ZNF474Q6S9Z5 364 aaPredicted RBP10.61□□□□□ -0.71
VPS16-202ENST00000380445 COMMD1Q8N668 190 aa10.61□□□□□ -0.71
VPS16-202ENST00000380445 LYPD6BQ8NI32 183 aa10.61□□□□□ -0.71
VPS16-202ENST00000380445 HIST1H2BAQ96A08 127 aa10.61□□□□□ -0.71
VPS16-202ENST00000380445 PPP1R3CQ9UQK1 317 aa10.61□□□□□ -0.71
VPS16-202ENST00000380445 GTF3C1Q12789 2109 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms