RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SSSCA1O60232 199 aa19.36■□□□□ 0.69
VPS16-201ENST00000380443 CAV2P51636 162 aa19.36■□□□□ 0.69
VPS16-201ENST00000380443 NHLH2Q02577 135 aa19.36■□□□□ 0.69
VPS16-201ENST00000380443 CR1LQ2VPA4 569 aa19.36■□□□□ 0.69
VPS16-201ENST00000380443 SPAG16Q8N0X2 631 aa19.36■□□□□ 0.69
VPS16-201ENST00000380443 COMMD1Q8N668 190 aa19.36■□□□□ 0.69
VPS16-201ENST00000380443 TMEM252Q8N6L7 170 aa19.36■□□□□ 0.69
VPS16-201ENST00000380443 Q8NA96 180 aa19.36■□□□□ 0.69
VPS16-201ENST00000380443 RNASE11Q8TAA1 199 aaKnown RBP19.36■□□□□ 0.69
VPS16-201ENST00000380443 OR2V2Q96R30 315 aa19.36■□□□□ 0.69
VPS16-201ENST00000380443 TMEM218A2RU14 115 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 C16orf97H3BN30 126 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 MGST3O14880 152 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 ZNF737O75373 536 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 FBXO24O75426 580 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 LHBP01229 141 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 SFTPCP11686 197 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 BMP5P22003 454 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 CD40P25942 277 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 RPL23AP62750 156 aaKnown RBP19.35■□□□□ 0.69
VPS16-201ENST00000380443 FAM27E3Q08E93 113 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 CATR1Q13166 79 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 GFRALQ6UXV0 394 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 CISD2Q8N5K1 135 aaKnown RBP19.35■□□□□ 0.69
VPS16-201ENST00000380443 CD177Q8N6Q3 437 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 LYPD6BQ8NI32 183 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 RAB9BQ9NP90 201 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 RNF115Q9Y4L5 304 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 FAM24AA6NFZ4 105 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 BTNL8Q6UX41 500 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 TMEM108Q6UXF1 575 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 BSCL2Q96G97 398 aaPredicted RBP19.35■□□□□ 0.69
VPS16-201ENST00000380443 COA4Q9NYJ1 87 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 IL19Q9UHD0 177 aa19.35■□□□□ 0.69
VPS16-201ENST00000380443 A0A0G2JNJ9 132 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 FAM90A26D6RGX4 464 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 SCO1O75880 301 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 DANCRP0C864 163 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 TNFSF4P23510 183 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 PTAFRP25105 342 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 ZNF585BQ52M93 769 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 GCSAMQ8N6F7 178 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 MRGPRDQ8TDS7 321 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 C17orf50Q8WW18 174 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 Q9UFV3 132 aa19.34■□□□□ 0.69
VPS16-201ENST00000380443 IGSF23A1L1A6 192 aa19.33■□□□□ 0.69
VPS16-201ENST00000380443 ATP6V1G2-DDX39BF2Z307 99 aa19.33■□□□□ 0.69
VPS16-201ENST00000380443 CHST1O43916 411 aa19.33■□□□□ 0.69
VPS16-201ENST00000380443 LPAR6P43657 344 aa19.33■□□□□ 0.69
VPS16-201ENST00000380443 GLIPR1P48060 266 aa19.33■□□□□ 0.69
VPS16-201ENST00000380443 RBPJQ06330 500 aa19.33■□□□□ 0.69
VPS16-201ENST00000380443 ALKBH2Q6NS38 261 aa19.33■□□□□ 0.69
VPS16-201ENST00000380443 ZNF66Q6ZN08 573 aa19.33■□□□□ 0.69
VPS16-201ENST00000380443 JKAMPQ9P055 326 aa19.33■□□□□ 0.69
VPS16-201ENST00000380443 SVILO95425 2214 aa19.33■□□□□ 0.68
VPS16-201ENST00000380443 ATMQ13315 3056 aa19.33■□□□□ 0.68
VPS16-201ENST00000380443 TRIM77I1YAP6 450 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 IGKV1-39P01597 117 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 APOC3P02656 99 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 IGKV1D-39P04432 117 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 AKR1C2P52895 323 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 EIF4EBP1Q13541 118 aaPredicted RBP19.32■□□□□ 0.68
VPS16-201ENST00000380443 OR52L2PQ8NGH6 319 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 EDARADDQ8WWZ3 215 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 NARS2Q96I59 477 aaKnown RBP19.32■□□□□ 0.68
VPS16-201ENST00000380443 MAGT1Q9H0U3 335 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 METRNQ9UJH8 293 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 WSB1Q9Y6I7 421 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 IGKV1D-17A0A075B6S4 117 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 KIAA1324LA8MWY0 1029 aaPredicted RBP19.32■□□□□ 0.68
VPS16-201ENST00000380443 EGR1P18146 543 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 TAS2R30P59541 319 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 FAM222BQ8WU58 562 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 DIRC2Q96SL1 478 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 PARP12Q9H0J9 701 aaKnown RBP19.32■□□□□ 0.68
VPS16-201ENST00000380443 HRH4Q9H3N8 390 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 LAMP3Q9UQV4 416 aa19.32■□□□□ 0.68
VPS16-201ENST00000380443 C15orf65H3BRN8 121 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 ATXN7O15265 892 aaPredicted RBP19.31■□□□□ 0.68
VPS16-201ENST00000380443 FAM87AP0C7U9 286 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 C10orf91Q5T1B1 145 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 CLEC9AQ6UXN8 241 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 Q6ZRG5 221 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 MOGAT3Q86VF5 341 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 STX12Q86Y82 276 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 OR13A1Q8NGR1 328 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 UBALD1Q8TB05 177 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 MRPL37Q9BZE1 423 aaKnown RBP19.31■□□□□ 0.68
VPS16-201ENST00000380443 OR2D2Q9H210 308 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 MMP24Q9Y5R2 645 aa19.31■□□□□ 0.68
VPS16-201ENST00000380443 A0A0G2JRQ6 117 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 ODAMA1E959 279 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 UMAD1C9J7I0 102 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 SPRY3O43610 288 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 DFFBO76075 338 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 ZNF16P17020 682 aaPredicted RBP19.3■□□□□ 0.68
VPS16-201ENST00000380443 VHLLQ6RSH7 139 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 Q8TCH9 128 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 ITLN1Q8WWA0 313 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 TSNAXQ99598 290 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms