RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SH2D1BO14796 132 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 EPHA1P21709 976 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 VDAC1P21796 283 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 BLOC1S1P78537 153 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 CLINT1Q14677 625 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 ZNF169Q14929 603 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 C10orf91Q5T1B1 145 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 Q8IYB0 196 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 PRSS33Q8NF86 280 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 TMEM171Q8WVE6 324 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 GINS3Q9BRX5 216 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 ESRP2Q9H6T0 727 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 ZNF71Q9NQZ8 489 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 PPP1R3CQ9UQK1 317 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 GVINP1Q7Z2Y8 2422 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 MEX3AA1L020 520 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 CLEC18AA5D8T8 446 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 PGPEP1LA6NFU8 196 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 TNFRSF6BO95407 300 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 HAND1O96004 215 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 IGKV1-39P01597 117 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 IGKV1D-39P04432 117 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 SPP1P10451 314 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 ID3Q02535 119 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 Q6ZRM9 215 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 CLEC18CQ8NCF0 446 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 HES4Q9HCC6 221 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 PARP11Q9NR21 331 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 ZFP57Q9NU63 452 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 MBNL3Q9NUK0 354 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 TREM2Q9NZC2 230 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 MUC6Q6W4X9 2439 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 IGHV2OR16-5A0A0B4J2B6 119 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 AHRRA9YTQ3 701 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 LINC00587B1AMM8 73 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 C1QTNF9BB2RNN3 333 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 RNASEK-C17orf49H0YIS7 233 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 HSPA12AO43301 675 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 CHST1O43916 411 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 TIMM8AO60220 97 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 CST7O76096 145 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 IGLV1-44P01699 117 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 DANCRP0C864 163 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 CEACAM6P40199 344 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 MDH2P40926 338 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 PAX9P55771 341 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 AESQ08117 197 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 MSMPQ1L6U9 139 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 TMEM177Q53S58 311 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 TMEM88Q6PEY1 159 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 ZADH2Q8N4Q0 377 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 TMEM252Q8N6L7 170 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 LYPD6BQ8NI32 183 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 GPR146Q96CH1 333 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 WIPI2Q9Y4P8 454 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 ANKRD11Q6UB99 2663 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 BORCS7-ASMTA0A0B4J1R7 106 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 TMEM210A6NLX4 147 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 NUDT19A8MXV4 375 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 NPIPB11E5RHQ5 1161 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 PTBP3O95758 552 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 HEXAP06865 529 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 SEC11BP0C7V7 166 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 CD80P33681 288 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 SPCS3P61009 180 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 RAB4BP61018 213 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 WDR82Q6UXN9 313 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 TMEM217Q8N7C4 229 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 SPIN2AQ99865 258 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 SPIN2BQ9BPZ2 258 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 FAM212BQ9NTI7 297 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 LYRM2Q9NU23 88 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 PROCRQ9UNN8 238 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 CARHSP1Q9Y2V2 147 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 RNF115Q9Y4L5 304 aa6.7□□□□□ -1.34
PDLIM5-204ENST00000380176 KIAA1324LA8MWY0 1029 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 FAM157AC9JC47 383 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 CD5P06127 495 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 NPBWR1P48145 328 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 F2RL1P55085 397 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 ZNF616Q08AN1 781 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 HMGN3Q15651 99 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 MIDNQ504T8 468 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 BHLHA15Q7RTS1 189 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 TPRX1Q8N7U7 411 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 OR1L1Q8NH94 360 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 FAM216AQ8WUB2 273 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 CACFD1Q9UGQ2 172 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 RNF150Q9ULK6 438 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 KCNS2Q9ULS6 477 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 PRELID3BQ9Y3B1 194 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 RBM7Q9Y580 266 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 DUXBA0A1W2PPF3 345 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 OR5H1A6NKK0 313 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 H3BP45 60 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 PITX3O75364 302 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 SERPINE2P07093 398 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 BMI1P35226 326 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 ZNF585BQ52M93 769 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 C1orf185Q5T7R7 199 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms