RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 MORN2Q502X0 79 aa13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 SLC25A30Q5SVS4 291 aa13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 Q8N1Y9 231 aa13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 OR13C5Q8NGS8 318 aa13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 FLYWCH2Q96CP2 140 aaKnown RBP13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 MRPS24Q96EL2 167 aaKnown RBP13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 ZNF184Q99676 751 aaPredicted RBP13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 FAM103A1Q9BTL3 118 aaKnown RBP13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 TAF9BQ9HBM6 251 aa13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 PEX16Q9Y5Y5 336 aa13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 UBE2QL1A1L167 161 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 EI24O14681 340 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 HSPA12AO43301 675 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 HSPB1P04792 205 aaKnown RBP13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 VEGFCP49767 419 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 MRPL28Q13084 256 aaKnown RBP13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 TMEM30BQ3MIR4 351 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 XAF1Q6GPH4 301 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 LYPD6Q86Y78 171 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 ODF3L1Q8IXM7 274 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 CLCC1Q96S66 551 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 BANF2Q9H503 90 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 SPACA1Q9HBV2 294 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 RETNQ9HD89 108 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 TPSG1Q9NRR2 321 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 C19orf73Q9NVV2 129 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 STUB1Q9UNE7 303 aa13.66□□□□□ -0.22
PDLIM4-202ENST00000379018 SAA2-SAA4A0A096LPE2 208 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 ZNF780AO75290 641 aaPredicted RBP13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 SAA2P0DJI9 122 aaPredicted RBP13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 HAGHQ16775 308 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 TRAT1Q6PIZ9 186 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 UNQ5815/PRO19632Q6UWF5 114 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 FAM131AQ6UXB0 335 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 JAGN1Q8N5M9 183 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 MUL1Q969V5 352 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 TMED9Q9BVK6 235 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 KCNIP1Q9NZI2 227 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 GAB2Q9UQC2 676 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 LRRC42Q9Y546 428 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 GMPPBQ9Y5P6 360 aa13.65□□□□□ -0.22
PDLIM4-202ENST00000379018 MAS1P04201 325 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 IFNA6P05013 189 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 ALPLP05186 524 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 CX3CL1P78423 397 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 ACTBL2Q562R1 376 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 C19orf54Q5BKX5 351 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 STEAP3Q658P3 488 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 GLIPR1L1Q6UWM5 242 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 GLDNQ6ZMI3 551 aaPredicted RBP13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 PPP1R27Q86WC6 154 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 NPBQ8NG41 125 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 OR52I1Q8NGK6 324 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 TUBA4BQ9H853 241 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 ZNF355PQ9NSJ1 428 aa13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 RCC2Q9P258 522 aaKnown RBP13.64□□□□□ -0.23
PDLIM4-202ENST00000379018 FCN1O00602 326 aa13.63□□□□□ -0.23
PDLIM4-202ENST00000379018 NDUFA3O95167 84 aa13.63□□□□□ -0.23
PDLIM4-202ENST00000379018 IGLV1-51P01701 117 aa13.63□□□□□ -0.23
PDLIM4-202ENST00000379018 TMEM267Q0VDI3 215 aaPredicted RBP13.63□□□□□ -0.23
PDLIM4-202ENST00000379018 ZNF660Q6AZW8 331 aaPredicted RBP13.63□□□□□ -0.23
PDLIM4-202ENST00000379018 AWAT2Q6E213 333 aa13.63□□□□□ -0.23
PDLIM4-202ENST00000379018 ZNF833PQ6ZTB9 187 aa13.63□□□□□ -0.23
PDLIM4-202ENST00000379018 FAM110AQ9BQ89 295 aa13.63□□□□□ -0.23
PDLIM4-202ENST00000379018 SELENOIQ9C0D9 397 aa13.63□□□□□ -0.23
PDLIM4-202ENST00000379018 JPT1Q9UK76 154 aa13.63□□□□□ -0.23
PDLIM4-202ENST00000379018 ANKRD34BA5PLL1 514 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 RRHO14718 337 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 ST8SIA5O15466 376 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 TRGV3P03979 118 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 GSTP1P09211 210 aaKnown RBP13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 GABRB1P18505 474 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 RAB40BQ12829 278 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 GPR176Q14439 515 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 RPL22L1Q6P5R6 122 aaKnown RBP13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 TCTEX1D1Q8N7M0 179 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 LFNGQ8NES3 379 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 OR2AK2Q8NG84 335 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 PYDC1Q8WXC3 89 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 RDH12Q96NR8 316 aa13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 CNOT2Q9NZN8 540 aaKnown RBP13.62□□□□□ -0.23
PDLIM4-202ENST00000379018 A0A1W2PPK0 400 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 A8MZ25 164 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 H7C2Y5 167 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 CRTAPO75718 401 aaPredicted RBP13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 RGS11O94810 467 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 BAG2O95816 211 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 EGR2P11161 476 aaPredicted RBP13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 SNRPBP14678 240 aaKnown RBP13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 CD40LGP29965 261 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 RPL39P5Q59GN2 51 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 OR2G6Q5TZ20 316 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 PYHIN1Q6K0P9 492 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 MRPL30Q8TCC3 161 aaKnown RBP13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 IL1F10Q8WWZ1 152 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 FAM46BQ96A09 425 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 Q96MT0 163 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 CKLFQ9UBR5 152 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 NKX1-2Q9UD57 310 aaPredicted RBP13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 RNF150Q9ULK6 438 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms