RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ITGB1BP1O14713 200 aa15.12■□□□□ 0.01
SSU72-203ENST00000378725 PTHLHP12272 177 aa15.12■□□□□ 0.01
SSU72-203ENST00000378725 MADCAM1Q13477 382 aa15.12■□□□□ 0.01
SSU72-203ENST00000378725 OR10X1Q8NGY0 326 aa15.12■□□□□ 0.01
SSU72-203ENST00000378725 OR5R1Q8NH85 324 aa15.12■□□□□ 0.01
SSU72-203ENST00000378725 FAM216AQ8WUB2 273 aa15.12■□□□□ 0.01
SSU72-203ENST00000378725 ST6GALNAC6Q969X2 333 aa15.12■□□□□ 0.01
SSU72-203ENST00000378725 DGCR14Q96DF8 476 aaKnown RBP15.12■□□□□ 0.01
SSU72-203ENST00000378725 CABLES2Q9BTV7 478 aa15.12■□□□□ 0.01
SSU72-203ENST00000378725 FAM25AB3EWG3 89 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 FAM25CB3EWG5 89 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 FAM25GB3EWG6 89 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 TPPPO94811 219 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 CEACAM6P40199 344 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 ZNF137PP52743 207 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 C16orf87Q6PH81 154 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 HOGA1Q86XE5 327 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 CHIAQ9BZP6 476 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 OR1A1Q9P1Q5 309 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 SLC23A1Q9UHI7 598 aa15.11■□□□□ 0.01
SSU72-203ENST00000378725 JMJD1CQ15652 2540 aa15.1■□□□□ 0.01
SSU72-203ENST00000378725 TRBV6-7A0A0A0MS04 114 aa15.1■□□□□ 0.01
SSU72-203ENST00000378725 H3BUX3 64 aa15.1■□□□□ 0.01
SSU72-203ENST00000378725 CBX5P45973 191 aa15.1■□□□□ 0.01
SSU72-203ENST00000378725 ZNF816Q0VGE8 651 aaPredicted RBP15.1■□□□□ 0.01
SSU72-203ENST00000378725 DIAPH2-AS1Q14236 149 aa15.1■□□□□ 0.01
SSU72-203ENST00000378725 IGSF11Q5DX21 431 aa15.1■□□□□ 0.01
SSU72-203ENST00000378725 CCDC144NLQ6NUI1 221 aa15.1■□□□□ 0.01
SSU72-203ENST00000378725 RPEQ96AT9 228 aa15.1■□□□□ 0.01
SSU72-203ENST00000378725 ABHD14AQ9BUJ0 271 aa15.1■□□□□ 0.01
SSU72-203ENST00000378725 C2CD3Q4AC94 2353 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 BTBD17A6NE02 478 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 RGS5O15539 181 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 HSPA12AO43301 675 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 IL3RAP26951 378 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 PRSS3P35030 304 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 RAB7AP51149 207 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 RAB13P51153 203 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 KRTAP24-1Q3LI83 254 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 CNIH2Q6PI25 160 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 LAX1Q8IWV1 398 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 ODF3L1Q8IXM7 274 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 GVQW1Q8N7I0 195 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 OR2AK2Q8NG84 335 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 TOMM40LQ969M1 308 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 AGMATQ9BSE5 352 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 TNFRSF19Q9NS68 423 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 EXTL2Q9UBQ6 330 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 ANXA10Q9UJ72 324 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 ADAM30Q9UKF2 790 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 VPREB3Q9UKI3 123 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 ANAPC10Q9UM13 185 aa15.09■□□□□ 0.01
SSU72-203ENST00000378725 MRPS7Q9Y2R9 242 aaKnown RBP15.09■□□□□ 0.01
SSU72-203ENST00000378725 GAPDHP04406 335 aaKnown RBP15.08■□□□□ 0
SSU72-203ENST00000378725 CTXN2P0C2S0 81 aa15.08■□□□□ 0
SSU72-203ENST00000378725 PLA1AQ53H76 456 aa15.08■□□□□ 0
SSU72-203ENST00000378725 FOXB2Q5VYV0 432 aa15.08■□□□□ 0
SSU72-203ENST00000378725 OR8H3Q8N146 312 aa15.08■□□□□ 0
SSU72-203ENST00000378725 BEST4Q8NFU0 473 aa15.08■□□□□ 0
SSU72-203ENST00000378725 OR10J5Q8NHC4 309 aa15.08■□□□□ 0
SSU72-203ENST00000378725 MCFD2Q8NI22 146 aa15.08■□□□□ 0
SSU72-203ENST00000378725 EDARADDQ8WWZ3 215 aa15.08■□□□□ 0
SSU72-203ENST00000378725 TMEM158Q8WZ71 300 aa15.08■□□□□ 0
SSU72-203ENST00000378725 PARP12Q9H0J9 701 aaKnown RBP15.08■□□□□ 0
SSU72-203ENST00000378725 C11orf54Q9H0W9 315 aaPredicted RBP15.08■□□□□ 0
SSU72-203ENST00000378725 IFI27L2Q9H2X8 130 aa15.08■□□□□ 0
SSU72-203ENST00000378725 GHITMQ9H3K2 345 aa15.08■□□□□ 0
SSU72-203ENST00000378725 ABCB10Q9NRK6 738 aa15.08■□□□□ 0
SSU72-203ENST00000378725 RDH8Q9NYR8 311 aa15.08■□□□□ 0
SSU72-203ENST00000378725 A3GALT2U3KPV4 340 aa15.08■□□□□ 0
SSU72-203ENST00000378725 A0A1W2PPI3 338 aa15.07■□□□□ 0
SSU72-203ENST00000378725 FAM90A9PA6NNJ1 464 aa15.07■□□□□ 0
SSU72-203ENST00000378725 HSD17B6O14756 317 aa15.07■□□□□ 0
SSU72-203ENST00000378725 BET1O15155 118 aa15.07■□□□□ 0
SSU72-203ENST00000378725 NAT1P18440 290 aa15.07■□□□□ 0
SSU72-203ENST00000378725 BRS3P32247 399 aa15.07■□□□□ 0
SSU72-203ENST00000378725 ARHGDIBP52566 201 aa15.07■□□□□ 0
SSU72-203ENST00000378725 RPL15P61313 204 aaKnown RBP15.07■□□□□ 0
SSU72-203ENST00000378725 LYG1Q8N1E2 194 aa15.07■□□□□ 0
SSU72-203ENST00000378725 GPX8Q8TED1 209 aa15.07■□□□□ 0
SSU72-203ENST00000378725 RTN4IP1Q8WWV3 396 aaPredicted RBP15.07■□□□□ 0
SSU72-203ENST00000378725 DCUN1D5Q9BTE7 237 aa15.07■□□□□ 0
SSU72-203ENST00000378725 C6orf62Q9GZU0 229 aaPredicted RBP15.07■□□□□ 0
SSU72-203ENST00000378725 SCPEP1Q9HB40 452 aa15.07■□□□□ 0
SSU72-203ENST00000378725 A6NDX4 124 aa15.06■□□□□ 0
SSU72-203ENST00000378725 SULT1C2O00338 296 aa15.06■□□□□ 0
SSU72-203ENST00000378725 ST8SIA5O15466 376 aa15.06■□□□□ 0
SSU72-203ENST00000378725 LANCL1O43813 399 aa15.06■□□□□ 0
SSU72-203ENST00000378725 LPLP06858 475 aa15.06■□□□□ 0
SSU72-203ENST00000378725 HABP2Q14520 560 aaPredicted RBP15.06■□□□□ 0
SSU72-203ENST00000378725 CCBE1Q6UXH8 406 aaPredicted RBP15.06■□□□□ 0
SSU72-203ENST00000378725 THNSL2Q86YJ6 484 aa15.06■□□□□ 0
SSU72-203ENST00000378725 SNX29P2Q8IUI4 249 aa15.06■□□□□ 0
SSU72-203ENST00000378725 H1FOOQ8IZA3 346 aaPredicted RBP15.06■□□□□ 0
SSU72-203ENST00000378725 C15orf40Q8WUR7 153 aa15.06■□□□□ 0
SSU72-203ENST00000378725 CFHR4Q92496 578 aa15.06■□□□□ 0
SSU72-203ENST00000378725 GCDHQ92947 438 aaPredicted RBP15.06■□□□□ 0
SSU72-203ENST00000378725 SNAPC3Q92966 411 aa15.06■□□□□ 0
SSU72-203ENST00000378725 ABHD1Q96SE0 405 aa15.06■□□□□ 0
SSU72-203ENST00000378725 MMP27Q9H306 513 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms