RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NAA60Q9H7X0 242 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 EMC9Q9Y3B6 208 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 LOC107986453A0A1B0GWG9 222 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 HELTA6NFD8 242 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 OR4C46A6NHA9 309 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 C11orf94C9JXX5 98 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 VENTXO95231 258 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 NTN1O95631 604 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 RFLNBQ8N5W9 214 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 MRGPRFQ96AM1 343 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 CLDN23Q96B33 292 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 KCNS1Q96KK3 526 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 SLC25A22Q9H936 323 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 KBTBD11-OT1A0A1B0GTJ5 212 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 TMEM229AB2RXF0 380 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 H3BML4 177 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 TNFRSF4P43489 277 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 SRSF6Q13247 344 aaKnown RBP10.23□□□□□ -0.77
NPHP4-202ENST00000378161 UBE2ZQ9H832 354 aaPredicted RBP10.23□□□□□ -0.77
NPHP4-202ENST00000378161 WDR54Q9H977 334 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 TMEM140Q9NV12 185 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 CD207Q9UJ71 328 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 SLC5A6Q9Y289 635 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 UTRNP46939 3433 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 EFEMP2O95967 443 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 POU3F1Q03052 451 aaPredicted RBP10.23□□□□□ -0.77
NPHP4-202ENST00000378161 VAX1Q5SQQ9 334 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 TMEM215Q68D42 235 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 ASPHD2Q6ICH7 369 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 LILRA6Q6PI73 481 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 PRSS57Q6UWY2 283 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 WDR5BQ86VZ2 330 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 ARHGEF39Q8N4T4 335 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 OR2T6Q8NHC8 308 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 VSTM2AQ8TAG5 236 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 MBD3L1Q8WWY6 194 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 ANKRD10Q9NXR5 420 aa10.23□□□□□ -0.77
NPHP4-202ENST00000378161 A0A1B0GWB2 263 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 FAM231BA6NCW3 169 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF735P0CB33 412 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 WDR38Q5JTN6 314 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 LINC00696Q6ZRV3 163 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 OR10AC1Q8NH08 325 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 LYPD6BQ8NI32 183 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 GPR27Q9NS67 375 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 TANC1Q9C0D5 1861 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 CEACAM5P06731 702 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 TMEM252Q8N6L7 170 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 LINC01555Q8NAE3 123 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 SPANXA1Q9NS26 97 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 VDAC3Q9Y277 283 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 CKAP5Q14008 2032 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 TRBV9A0A0B4J1U6 114 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 A0A0G2JLM5 398 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 A0A1B0GUS0 222 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 PAGE4O60829 102 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 G6PCP35575 357 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 RPS27P42677 84 aaKnown RBP10.22□□□□□ -0.77
NPHP4-202ENST00000378161 LGALS7P47929 136 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF260Q3ZCT1 412 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF324BQ6AW86 544 aaPredicted RBP10.22□□□□□ -0.77
NPHP4-202ENST00000378161 LYZL2Q7Z4W2 148 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 SLC25A40Q8TBP6 338 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 TMEM70Q9BUB7 260 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 QTRT1Q9BXR0 403 aaKnown RBP10.22□□□□□ -0.77
NPHP4-202ENST00000378161 HES4Q9HCC6 221 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 C20orf141Q9NUB4 165 aa10.22□□□□□ -0.77
NPHP4-202ENST00000378161 SOX21Q9Y651 276 aaPredicted RBP10.22□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF324O75467 553 aaPredicted RBP10.21□□□□□ -0.77
NPHP4-202ENST00000378161 SRIP30626 198 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 CYB561P49447 251 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 PSG6Q00889 435 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 PRDX4Q13162 271 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 SGCBQ16585 318 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 KIAA1644Q3SXP7 199 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 TCF23Q7RTU1 214 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 TAAR3PQ9P1P4 343 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 C19orf67A6NJJ6 358 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 LYL1P12980 280 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF17P17021 662 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 GPR6P46095 362 aaPredicted RBP10.21□□□□□ -0.77
NPHP4-202ENST00000378161 RPS11P62280 158 aaKnown RBP eCLIP10.21□□□□□ -0.77
NPHP4-202ENST00000378161 RHOGP84095 191 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 TCTEX1D4Q5JR98 221 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF841Q6ZN19 808 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 TMEM136Q6ZRR5 245 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 FAM19A2Q8N3H0 131 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 DEFB119Q8N690 84 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 NT5CQ8TCD5 201 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF442Q9H7R0 627 aa10.21□□□□□ -0.77
NPHP4-202ENST00000378161 A0A0B4J2E0 115 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 A0A1B0GX12 115 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 METTL12A8MUP2 240 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 IFNL4K9M1U5 179 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 KLF4O43474 513 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 APCSP02743 223 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 POU2F2P09086 479 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 SMIM13P0DJ93 91 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 FBXL14Q8N1E6 418 aa10.21□□□□□ -0.78
NPHP4-202ENST00000378161 BATF2Q8N1L9 274 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms