RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 LDLRAD3Q86YD5 345 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 C9orf40Q8IXQ3 194 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 C5orf17Q8NAS9 161 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 MRPL30Q8TCC3 161 aaKnown RBP10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 TIMP4Q99727 224 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 ATG101Q9BSB4 218 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 AP5S1Q9NUS5 200 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 ACP1P24666 158 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 LYRM7Q5U5X0 104 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 BPIFA4PQ86YQ2 179 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 OR2D3Q8NGH3 330 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 TMEM140Q9NV12 185 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 CISD1Q9NZ45 108 aaKnown RBP10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 OR6C3Q9NZP0 311 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 CES1P1Q9UKY3 287 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 ZNFX1Q9P2E3 1918 aaKnown RBP10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 IGHV3-72A0A0B4J1Y9 119 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 MOGAT3Q86VF5 341 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 OR2W1Q9Y3N9 320 aa10.44□□□□□ -0.74
PCDHA9-201ENST00000378122 KLK2P20151 261 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 HIKESHIQ53FT3 197 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 C10orf113Q5VZT2 155 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 RNF133Q8WVZ7 376 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 PRSS27Q9BQR3 290 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 OR4C46A6NHA9 309 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 CYB5R3P00387 301 aaPredicted RBP10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 FBLIM1Q8WUP2 373 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 OIT3Q8WWZ8 545 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 P2RX4Q99571 388 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 GPR35Q9HC97 309 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 RHBDL1O75783 438 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 CEACAM3P40198 252 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 ZNF137PP52743 207 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 RAC3P60763 192 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 ASCL3Q9NQ33 180 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 A0A1B0GU03 582 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 PGA4P0DJD7 388 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 PGA5P0DJD9 388 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 HKR1P10072 659 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 VDAC1P21796 283 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 RARRES2Q99969 163 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 IFITM10A6NMD0 228 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 NRN1LQ496H8 165 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 COL5A1-AS1Q5SY13 56 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 OR5R1Q8NH85 324 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 ZNF721Q8TF20 911 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 ABHD3Q8WU67 409 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 WFDC6Q9BQY6 131 aa10.43□□□□□ -0.74
PCDHA9-201ENST00000378122 HOXA6P31267 233 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 RUNX1Q01196 453 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 OR2M3Q8NG83 312 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 CCL3P10147 92 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 FAM3BP58499 235 aaPredicted RBP10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 ZNF488Q96MN9 340 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 IGSF23A1L1A6 192 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 NPIPB8E9PQR5 432 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 SPINT1O43278 529 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 LMX1BO60663 402 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 GABRA6Q16445 453 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 OR11H4Q8NGC9 324 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 COL24A1Q17RW2 1714 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 LNP1A1A4G5 178 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 FCGR3AP08637 254 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 AESQ08117 197 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 RIGQ13278 110 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 NSUN5P1Q3KNT7 163 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 RHBDD2Q6NTF9 364 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 SSX8Q7RTT4 187 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 SF3B5Q9BWJ5 86 aaKnown RBP10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 POLR2AP24928 1970 aaKnown RBP10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 LOC389332A0A1B0GUA5 103 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 SIAH2O43255 324 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 ADAM11O75078 769 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 HINT1P49773 126 aaPredicted RBP10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 RELBQ01201 579 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 OR4X1Q8NH49 305 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 TMEM38BQ9NVV0 291 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 CTXND1A0A1B0GTU2 59 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 TMEM262E9PQX1 116 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 LRRC75AQ8NAA5 344 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 OR1P1Q8NH06 330 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 CHST5Q9GZS9 411 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 OR51M1Q9H341 326 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 TINAGQ9UJW2 476 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 KCNK7Q9Y2U2 307 aa10.42□□□□□ -0.74
PCDHA9-201ENST00000378122 RBBP6Q7Z6E9 1792 aaKnown RBP10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 HLA-DQB1P01920 261 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 BCL2P10415 239 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 PRB3Q04118 309 aaPredicted RBP10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 UNQ6494/PRO21346Q6UXR6 183 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 MUC15Q8N387 334 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 SMIM12Q96EX1 92 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 SOSTQ9BQB4 213 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 HSPB9Q9BQS6 159 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 RNF122Q9H9V4 155 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 UNC13CQ8NB66 2214 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 UQCRFS1P47985 274 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 KCNMB1Q16558 191 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 ANKRD55Q3KP44 614 aa10.41□□□□□ -0.74
PCDHA9-201ENST00000378122 OR2Y1Q8NGV0 311 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms