RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TOLLIPQ9H0E2 274 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 OR14J1Q9UGF5 321 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 C21orf140B9A014 251 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 KLRC4-KLRK1H3BQV0 150 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 CYB5BO43169 146 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
MSH5-201ENST00000375703 SERF2P84101 59 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 ZNF726P1Q15940 193 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 FAM90A2PQ658T7 463 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 WDR86Q86TI4 376 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 HAPLN4Q86UW8 402 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 Q8IYB0 196 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 ZNF610Q8N9Z0 462 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 DEFB127Q9H1M4 99 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 DOK5Q9P104 306 aa12.31□□□□□ -0.44
MSH5-201ENST00000375703 BCL2P10415 239 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 CDX1P47902 265 aaPredicted RBP12.3□□□□□ -0.44
MSH5-201ENST00000375703 TBC1D28Q2M2D7 210 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 TMEM9BQ9NQ34 198 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 POLDIP2Q9Y2S7 368 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 KLF13Q9Y2Y9 288 aaPredicted RBP12.3□□□□□ -0.44
MSH5-201ENST00000375703 IGHV3-64DA0A0J9YX35 117 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 A0A1W2PNU3 283 aaPredicted RBP12.3□□□□□ -0.44
MSH5-201ENST00000375703 CDIPTO14735 213 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 SH2D1BO14796 132 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 NXPH2O95156 264 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 ERVK11-1P61568 191 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 FGFRL1Q8N441 504 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 DRAM1Q8N682 238 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 OR4C12Q96R67 309 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 OR2J1Q9GZK6 312 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 TINAGQ9UJW2 476 aa12.3□□□□□ -0.44
MSH5-201ENST00000375703 FAM180AQ6UWF9 173 aa12.29□□□□□ -0.44
MSH5-201ENST00000375703 RCC1LQ96I51 464 aaKnown RBP12.29□□□□□ -0.44
MSH5-201ENST00000375703 COL27A1Q8IZC6 1860 aaPredicted RBP12.29□□□□□ -0.44
MSH5-201ENST00000375703 KMT2EQ8IZD2 1858 aa12.29□□□□□ -0.44
MSH5-201ENST00000375703 SSX7Q7RTT5 188 aa12.29□□□□□ -0.44
MSH5-201ENST00000375703 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.29□□□□□ -0.44
MSH5-201ENST00000375703 GGACTQ9BVM4 153 aa12.29□□□□□ -0.44
MSH5-201ENST00000375703 WDR61Q9GZS3 305 aaKnown RBP12.29□□□□□ -0.44
MSH5-201ENST00000375703 ARRDC1-AS1Q9H2J1 176 aa12.29□□□□□ -0.44
MSH5-201ENST00000375703 MBNL3Q9NUK0 354 aaKnown RBP12.29□□□□□ -0.44
MSH5-201ENST00000375703 WIPI2Q9Y4P8 454 aa12.29□□□□□ -0.44
MSH5-201ENST00000375703 TRGC2P03986 189 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 ZNF883P0CG24 379 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 PPP1CBP62140 327 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 PNRC1Q12796 327 aaPredicted RBP12.28□□□□□ -0.44
MSH5-201ENST00000375703 MRPL49Q13405 166 aaKnown RBP12.28□□□□□ -0.44
MSH5-201ENST00000375703 CELSR3Q9NYQ7 3312 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 TNRC18O15417 2968 aaPredicted RBP12.28□□□□□ -0.44
MSH5-201ENST00000375703 GRPP07492 148 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 CELA3BP08861 270 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 PGA5P0DJD9 388 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 ZNF146Q15072 292 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 TMEM41BQ5BJD5 291 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 MYPOPQ86VE0 399 aaPredicted RBP12.28□□□□□ -0.44
MSH5-201ENST00000375703 CA5BP1Q8WTZ4 195 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 PINX1Q96BK5 328 aaKnown RBP12.28□□□□□ -0.44
MSH5-201ENST00000375703 WDYHV1Q96HA8 205 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 P2RX4Q99571 388 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 IL17BQ9UHF5 180 aa12.28□□□□□ -0.44
MSH5-201ENST00000375703 IFITM10A6NMD0 228 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 RNF212BA8MTL3 300 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 CEBPZOSA8MTT3 80 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST1H2BKO60814 126 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST1H2BJP06899 126 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST1H2BOP23527 126 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST1H2BBP33778 126 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST1H2BDP58876 126 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 ERVS71-1P61550 626 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST1H2BCP62807 126 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST2H2BEQ16778 126 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 ALKBH6Q3KRA9 238 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.27□□□□□ -0.44
MSH5-201ENST00000375703 MRGPRGQ86SM5 289 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 TAF15Q92804 592 aaKnown RBP eCLIP12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST1H2BHQ93079 126 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST1H2BNQ99877 126 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 HIST1H2BMQ99879 126 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 SDF2L1Q9HCN8 221 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 DCAF16Q9NXF7 216 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 VAX2Q9UIW0 290 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 DNAJC13O75165 2243 aa12.27□□□□□ -0.44
MSH5-201ENST00000375703 CLDN34H7C241 214 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 BTF3P20290 206 aaKnown RBP12.27□□□□□ -0.45
MSH5-201ENST00000375703 S100A2P29034 98 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 MPLP40238 635 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 ELLP55199 621 aaPredicted RBP12.27□□□□□ -0.45
MSH5-201ENST00000375703 ACSF3Q4G176 576 aaPredicted RBP12.27□□□□□ -0.45
MSH5-201ENST00000375703 OR8G2PQ6IF36 304 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 MDS2Q8NDY4 140 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 FAM210BQ96KR6 192 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 CDH20Q9HBT6 801 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 SLC39A9Q9NUM3 307 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 TMEM242Q9NWH2 141 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 GAR1Q9NY12 217 aaKnown RBP12.27□□□□□ -0.45
MSH5-201ENST00000375703 KCNIP1Q9NZI2 227 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 ESPL1Q14674 2120 aa12.27□□□□□ -0.45
MSH5-201ENST00000375703 FAM90A26D6RGX4 464 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 SMPD2O60906 423 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms