RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 TMEM170AQ8WVE7 144 aa17.96■□□□□ 0.47
UPF3A-202ENST00000375299 RPUSD4Q96CM3 377 aaKnown RBP17.96■□□□□ 0.47
UPF3A-202ENST00000375299 LURAP1Q96LR2 239 aa17.96■□□□□ 0.47
UPF3A-202ENST00000375299 FSCN3Q9NQT6 498 aa17.96■□□□□ 0.47
UPF3A-202ENST00000375299 UBE2L5PA0A1B0GUS4 154 aa17.96■□□□□ 0.47
UPF3A-202ENST00000375299 GDF9O60383 454 aa17.96■□□□□ 0.47
UPF3A-202ENST00000375299 SNRPCP09234 159 aaKnown RBP17.96■□□□□ 0.47
UPF3A-202ENST00000375299 SPCS3P61009 180 aa17.96■□□□□ 0.47
UPF3A-202ENST00000375299 SLC23A3Q6PIS1 610 aa17.96■□□□□ 0.47
UPF3A-202ENST00000375299 MRPL21Q7Z2W9 205 aaKnown RBP17.96■□□□□ 0.47
UPF3A-202ENST00000375299 ZNF705GA8MUZ8 300 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-202ENST00000375299 HS3ST1O14792 307 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 IGKV1D-33P01593 117 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 IGKV1-33P01594 117 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 FAM3BP58499 235 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-202ENST00000375299 USF2Q15853 346 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-202ENST00000375299 SPANXN5Q5MJ07 72 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 RPP25LQ8N5L8 163 aaKnown RBP17.95■□□□□ 0.46
UPF3A-202ENST00000375299 RDH5Q92781 318 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 STRADBQ9C0K7 418 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 TIMM9Q9Y5J7 89 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 LRRC3CA6NJW4 275 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 TMEM250H0YL14 139 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 DEGS1O15121 323 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 ZNHIT1O43257 154 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 HRASP01112 189 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 IGLV2-14P01704 120 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 FGF5P12034 268 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 SLC38A11Q08AI6 406 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 OR1K1Q8NGR3 316 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 OR1A1Q9P1Q5 309 aa17.95■□□□□ 0.46
UPF3A-202ENST00000375299 IL18BPO95998 194 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 IGHV3-9P01782 118 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 APLNRP35414 380 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 NRN1LQ496H8 165 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 LYSMD4Q5XG99 296 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 ABHD3Q8WU67 409 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 PCGF1Q9BSM1 259 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 ELOVL1Q9BW60 279 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 DDA1Q9BW61 102 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 PARLQ9H300 379 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 TRAV24A0A0B4J272 114 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 PSMB3P49720 205 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 IDH3GP51553 393 aaPredicted RBP17.94■□□□□ 0.46
UPF3A-202ENST00000375299 TCEAL6Q6IPX3 200 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 IL1F10Q8WWZ1 152 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 ZNF488Q96MN9 340 aa17.94■□□□□ 0.46
UPF3A-202ENST00000375299 NUBP1P53384 320 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 ACTL10Q5JWF8 245 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 TGIF2LXQ8IUE1 241 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 AGBL5Q8NDL9 886 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 OR5A2Q8NGI9 324 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 OR51I2Q9H344 312 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 TMEM9BQ9NQ34 198 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 PPP1R3CQ9UQK1 317 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 WDFY3Q8IZQ1 3526 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 A0A1W2PPQ1 181 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 NPIPB11E5RHQ5 1161 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 CYTIPO60759 359 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 CCL2P13500 99 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 RAB4BP61018 213 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 SLC10A1Q14973 349 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 RTP5Q14D33 572 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 ZNF585BQ52M93 769 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.93■□□□□ 0.46
UPF3A-202ENST00000375299 ANAPC16Q96DE5 110 aa17.93■□□□□ 0.46
UPF3A-202ENST00000375299 ZNF552Q9H707 407 aaPredicted RBP17.93■□□□□ 0.46
UPF3A-202ENST00000375299 LIN7CQ9NUP9 197 aaKnown RBP17.93■□□□□ 0.46
UPF3A-202ENST00000375299 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.92■□□□□ 0.46
UPF3A-202ENST00000375299 KLF7O75840 302 aaPredicted RBP17.92■□□□□ 0.46
UPF3A-202ENST00000375299 P04436 131 aa17.92■□□□□ 0.46
UPF3A-202ENST00000375299 RFPL3SP0C7P2 107 aa17.92■□□□□ 0.46
UPF3A-202ENST00000375299 WIPI1Q5MNZ9 446 aaPredicted RBP17.92■□□□□ 0.46
UPF3A-202ENST00000375299 ACSM6Q6P461 480 aa17.92■□□□□ 0.46
UPF3A-202ENST00000375299 PI4KAP42356 2102 aa17.92■□□□□ 0.46
UPF3A-202ENST00000375299 C5orf49A4QMS7 147 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 ZNF16P17020 682 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-202ENST00000375299 TLE1Q04724 770 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 TESK1Q15569 626 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 CLEC12BQ2HXU8 276 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 TMEM18Q96B42 140 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 SGCZQ96LD1 299 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 SLC25A22Q9H936 323 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 PRDM6Q9NQX0 595 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 DLL3Q9NYJ7 618 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 FUT9Q9Y231 359 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 CTXND1A0A1B0GTU2 59 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 ARF1P84077 181 aaKnown RBP17.91■□□□□ 0.46
UPF3A-202ENST00000375299 HLA-BQ31612 363 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 ACOT6Q3I5F7 207 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-202ENST00000375299 TMEM14EPQ6UXP3 125 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 TMEM45BQ96B21 275 aa17.91■□□□□ 0.46
UPF3A-202ENST00000375299 ZNF407Q9C0G0 2248 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 HMGB3O15347 200 aaKnown RBP17.9■□□□□ 0.46
UPF3A-202ENST00000375299 GGCTO75223 188 aaKnown RBP17.9■□□□□ 0.46
UPF3A-202ENST00000375299 HOXA6P31267 233 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 OR8G2PQ6IF36 304 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 OR4F5Q8NH21 305 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 TMEM37Q8WXS4 190 aa17.9■□□□□ 0.46
UPF3A-202ENST00000375299 APOBEC3DQ96AK3 386 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms