RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 P2RX3P56373 397 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 EIF5AP63241 154 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 GPR157Q5UAW9 335 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 TEX36Q5VZQ5 186 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 THOC7Q6I9Y2 204 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ADAM5Q6NVV9 412 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 TPRX1Q8N7U7 411 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 DMBX1Q8NFW5 382 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ARL11Q969Q4 196 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 MARVELD3Q96A59 401 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 PRORYQ9H606 182 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 PLEKHF2Q9H8W4 249 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 PPP1R3CQ9UQK1 317 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 RCL1Q9Y2P8 373 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 USF3Q68DE3 2245 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 SHISA9B4DS77 424 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 GAPDHP04406 335 aaKnown RBP15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 SFTPCP11686 197 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 EIF4EBP1Q13541 118 aaPredicted RBP15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 EDDM3AQ14507 147 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 GNMTQ14749 295 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 FAM209AQ5JX71 171 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 DMRTC2Q8IXT2 367 aaPredicted RBP15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 RNASE6Q93091 150 aaKnown RBP15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 LSM10Q969L4 123 aaKnown RBP15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 CXorf58Q96LI9 332 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 A0A1B0GW55 424 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 CCL21O00585 134 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 GPR137BO60478 399 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 DUX4L2P0CJ85 424 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 DUX4L3P0CJ86 424 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 DUX4L4P0CJ87 422 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 DUX4L5P0CJ88 424 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 DUX4L6P0CJ89 424 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 DUX4L7P0CJ90 424 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 IRF2P14316 349 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 MUC1P15941 1255 aaPredicted RBP15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 NKX2-1P43699 371 aaPredicted RBP15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 C14orf79Q96F83 325 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 FAM234AQ9H0X4 552 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ZC4H2Q9NQZ6 224 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 DUX4Q9UBX2 424 aa15□□□□□ -0.01
HLA-DQB1-201ENST00000374943 A0A1B0GU03 582 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ATXN7O15265 892 aaPredicted RBP14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 PPP1CCP36873 323 aaKnown RBP14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ID3Q02535 119 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 GALNT11Q8NCW6 608 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ZNRF1Q8ND25 227 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 LRRC20Q8TCA0 184 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 REG4Q9BYZ8 158 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 OR2D2Q9H210 308 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 OR2S2Q9NQN1 319 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 FAM212BQ9NTI7 297 aaPredicted RBP14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 OR6C3Q9NZP0 311 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 FBXL17Q9UF56 701 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 PFDN2Q9UHV9 154 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 JPT1Q9UK76 154 aa14.99□□□□□ -0.01
HLA-DQB1-201ENST00000374943 F2RL2O00254 374 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 PITX3O75364 302 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 CYB5R3P00387 301 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 IGKV1-39P01597 117 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 IGKV1D-39P04432 117 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 MMP9P14780 707 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 TLE1Q04724 770 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 AANATQ16613 207 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ZNF585BQ52M93 769 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 FAM74A1Q5RGS3 127 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 FAM201AQ5SY85 155 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 PLPPR2Q96GM1 343 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 C5orf30Q96GV9 206 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 GAFA1Q96PS6 74 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 DCTN5Q9BTE1 182 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ARFGEF3Q5TH69 2177 aa14.98□□□□□ -0.01
HLA-DQB1-201ENST00000374943 MFSD2BA6NFX1 497 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 LRRC30A6NM36 301 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 CGB3P0DN86 165 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 CGB7P0DN87 165 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 PVALBP20472 110 aaPredicted RBP14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 TMEM33P57088 247 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ZNF788Q6ZQV5 615 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 TCTEX1D1Q8N7M0 179 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 EDARADDQ8WWZ3 215 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 EGLN1Q9GZT9 426 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ZNF665Q9H7R5 613 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 RAB9BQ9NP90 201 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 COQ3Q9NZJ6 369 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 E7EQL1 145 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 FGF16O43320 207 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 JTBO76095 146 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 CCL8P80075 99 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ADORA2A-AS1P86434 159 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 EFNB3Q15768 340 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 TOR2AQ5JU69 321 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 FAM53AQ6NSI3 398 aaPredicted RBP14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 GPR146Q96CH1 333 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 BARX1Q9HBU1 254 aaPredicted RBP14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 SDHAF2Q9NX18 166 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 NDRG3Q9UGV2 375 aa14.97□□□□□ -0.01
HLA-DQB1-201ENST00000374943 NBEAQ8NFP9 2946 aa14.96□□□□□ -0.01
HLA-DQB1-201ENST00000374943 A0A0G2JRQ6 117 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms