RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CD79AP11912 226 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 CD82P27701 267 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 FCGR2CP31995 323 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 OPRM1P35372 400 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 AMTP48728 403 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 PIGPP57054 158 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 HERV-K104P61576 105 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 RND3P61587 244 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 SRPXP78539 464 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 PLGLB1Q02325 96 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 PRDX4Q13162 271 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 HNF4GQ14541 408 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 IL13RA2Q14627 380 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 SMCO1Q147U7 214 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 IZUMO4Q1ZYL8 232 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 IAH1Q2TAA2 248 aaPredicted RBP4.02□□□□□ -1.77
USP48-202ENST00000374730 CEACAM21Q3KPI0 293 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 ABCA11PQ4W5N1 156 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 SERTAD4-AS1Q5TG53 156 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 HES3Q5TGS1 186 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 TMEM268Q5VZI3 342 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 GGNBP1Q5YKI7 109 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 UNQ6126/PRO20091Q6UXV3 157 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 IL34Q6ZMJ4 242 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 SLC25A26Q70HW3 274 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 MRPL21Q7Z2W9 205 aaKnown RBP4.02□□□□□ -1.77
USP48-202ENST00000374730 MKXQ8IYA7 352 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 BHLHE23Q8NDY6 225 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 OR5A2Q8NGI9 324 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 OR1S2Q8NGQ3 325 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 OR1K1Q8NGR3 316 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 LHFPL5Q8TAF8 219 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 C2CD4CQ8TF44 421 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 RTN4IP1Q8WWV3 396 aaPredicted RBP4.02□□□□□ -1.77
USP48-202ENST00000374730 GTF3AQ92664 365 aaKnown RBP4.02□□□□□ -1.77
USP48-202ENST00000374730 MARC2Q969Z3 335 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 MRPL24Q96A35 216 aaKnown RBP4.02□□□□□ -1.77
USP48-202ENST00000374730 C18orf12Q96KH6 178 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 POM121L2Q96KW2 1035 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 PAPOLGQ9BWT3 736 aaKnown RBP4.02□□□□□ -1.77
USP48-202ENST00000374730 PRRG4Q9BZD6 226 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 FGF23Q9GZV9 251 aaPredicted RBP4.02□□□□□ -1.77
USP48-202ENST00000374730 PLK3Q9H4B4 646 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 ZNF442Q9H7R0 627 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 CALHM2Q9HA72 323 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 RHOFQ9HBH0 211 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 SPACA1Q9HBV2 294 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 TMEM9BQ9NQ34 198 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 MMP26Q9NRE1 261 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 SLC2A9Q9NRM0 540 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 ASF1BQ9NVP2 202 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 TAS2R3Q9NYW6 316 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 IL17BQ9UHF5 180 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 KCNIP3Q9Y2W7 256 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 TMED3Q9Y3Q3 217 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 ZNF175Q9Y473 711 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 MPC1Q9Y5U8 109 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 POMT1Q9Y6A1 747 aa4.02□□□□□ -1.77
USP48-202ENST00000374730 KMT2BQ9UMN6 2715 aaPredicted RBP4.02□□□□□ -1.77
USP48-202ENST00000374730 FAM186AA6NE01 2351 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 TRBV6-6A0A0A6YYG2 114 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 KIR2DS1A0A191URI9 304 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 C5orf49A4QMS7 147 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 CD300LBA8K4G0 201 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 E5RGE8 158 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 TRAPPC2LH3BP13 241 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 K7EPK0 472 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 LGALS8O00214 317 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 OR7C1O76099 320 aaPredicted RBP4.01□□□□□ -1.77
USP48-202ENST00000374730 TNFSF15O95150 251 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 CDS2O95674 445 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 PPYP01298 95 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 IGHV3-9P01782 118 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 HLA-HP01893 362 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 WNT2P09544 360 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 CTXN2P0C2S0 81 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 OR5AC1P0C628 307 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 FAM157CP0CG43 387 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 BCL3P20749 454 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 AADACP22760 399 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 RPL12P30050 165 aaKnown RBP4.01□□□□□ -1.77
USP48-202ENST00000374730 RFC3P40938 356 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 KIR2DS4P43632 304 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 NPBWR2P48146 333 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 KCNJ3P48549 501 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 SULT1A2P50226 295 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 TMPRSS3P57727 454 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 S100A10P60903 97 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 SRYQ05066 204 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 ZNF273Q14593 569 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 KIR2DS1Q14954 304 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 SLC10A1Q14973 349 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 C10orf91Q5T1B1 145 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 GPR157Q5UAW9 335 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 FBXW9Q5XUX1 488 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 C16orf82Q7Z2V1 217 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 NUFIP2Q7Z417 695 aaKnown RBP4.01□□□□□ -1.77
USP48-202ENST00000374730 ZNF573Q86YE8 665 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 LGI3Q8N145 548 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 FAM71E2Q8N5Q1 922 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms