RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 GCSAMLQ5JQS6 135 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 ABLIM2Q6H8Q1 611 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 LOXL4Q96JB6 756 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 C1RLQ9NZP8 487 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 FAM181BA6NEQ2 426 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 CCL8P80075 99 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 SPATA45Q537H7 98 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 ATG4DQ86TL0 474 aaPredicted RBP12.47□□□□□ -0.41
TRAF1-201ENST00000373887 ZNF665Q9H7R5 613 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 ZNF385AQ96PM9 386 aaKnown RBP12.47□□□□□ -0.41
TRAF1-201ENST00000373887 TMEM189A5PLL7 270 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 KRTCAP3Q53RY4 240 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 CALHM1Q8IU99 346 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 PAXXQ9BUH6 204 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 RNF7Q9UBF6 113 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 PPYP01298 95 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 ADRA2AP08913 450 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 PRF1P14222 555 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 RCC1P18754 421 aaPredicted RBP12.47□□□□□ -0.41
TRAF1-201ENST00000373887 MAS1LP35410 378 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 OR2H1Q9GZK4 316 aa12.47□□□□□ -0.41
TRAF1-201ENST00000373887 B4DEV8 164 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 B4E171 279 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 TSPAN7P41732 249 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 TMEM50BP56557 158 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 TEPPQ6URK8 271 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 PTP4A1Q93096 173 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 FRRS1LQ9P0K9 344 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 PRNDQ9UKY0 176 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 F11RQ9Y624 299 aaKnown RBP12.46□□□□□ -0.41
TRAF1-201ENST00000373887 CENPVL1A0A0U1RR11 272 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 GAGE10A6NGK3 116 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 K7ERU9 68 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 MOB4Q9Y3A3 225 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 LNP1A1A4G5 178 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 SMAD7O15105 426 aaKnown RBP12.46□□□□□ -0.41
TRAF1-201ENST00000373887 CRHP06850 196 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 COX6CP09669 75 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 ADAMTS17Q8TE56 1095 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 TMEM38BQ9NVV0 291 aa12.46□□□□□ -0.41
TRAF1-201ENST00000373887 FAM53AQ6NSI3 398 aaPredicted RBP12.46□□□□□ -0.42
TRAF1-201ENST00000373887 MRPL30Q8TCC3 161 aaKnown RBP12.46□□□□□ -0.42
TRAF1-201ENST00000373887 RAXQ9Y2V3 346 aa12.46□□□□□ -0.42
TRAF1-201ENST00000373887 MYO16Q9Y6X6 1858 aa12.46□□□□□ -0.42
TRAF1-201ENST00000373887 CDCP2Q5VXM1 449 aa12.46□□□□□ -0.42
TRAF1-201ENST00000373887 GMPPAQ96IJ6 420 aaPredicted RBP12.46□□□□□ -0.42
TRAF1-201ENST00000373887 DLEC1Q9Y238 1755 aa12.46□□□□□ -0.42
TRAF1-201ENST00000373887 A0A1W2PQD3 144 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 FFAR1O14842 300 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 GDF9O60383 454 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 ZNF735P0CB33 412 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 MRAP2Q96G30 205 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 C16orf92Q96LL3 132 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 HDHD3Q9BSH5 251 aaPredicted RBP12.45□□□□□ -0.42
TRAF1-201ENST00000373887 PARP11Q9NR21 331 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 IGKV1D-16P01601 117 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.45□□□□□ -0.42
TRAF1-201ENST00000373887 OR11H7Q8NGC8 314 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 BEX4Q9NWD9 120 aaPredicted RBP12.45□□□□□ -0.42
TRAF1-201ENST00000373887 MGAT2Q10469 447 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 LRRC75BQ2VPJ9 315 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 HIST1H4GQ99525 98 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 MARVELD1Q9BSK0 173 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 COX19Q49B96 90 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 PITPNC1Q9UKF7 332 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 HILPDAQ9Y5L2 63 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 KBTBD11O94819 623 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 FABP2P12104 132 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 MFAP2P55001 183 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 COL10A1Q03692 680 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 TTC32Q5I0X7 151 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 DEGS2Q6QHC5 323 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 ZNF738Q8NE65 137 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 HSPB9Q9BQS6 159 aa12.45□□□□□ -0.42
TRAF1-201ENST00000373887 TMEM238LA0A1B0GVL6 79 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 A6NJY4 79 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 J3QR06 171 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 SYNGR1O43759 233 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 PLAUP00749 431 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 FBXW9Q5XUX1 488 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 EBLN2Q6P2I7 272 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 MRGPRGQ86SM5 289 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 LINC00469Q8N7U9 141 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 GHITMQ9H3K2 345 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 HEXA-AS1Q9H8Q6 139 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 TSPAN13O95857 204 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 CLPPQ16740 277 aaPredicted RBP12.44□□□□□ -0.42
TRAF1-201ENST00000373887 ASB5Q8WWX0 329 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 OIT3Q8WWZ8 545 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 METTL26Q96S19 204 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 TIMP4Q99727 224 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 SF3B5Q9BWJ5 86 aaKnown RBP12.44□□□□□ -0.42
TRAF1-201ENST00000373887 IL36RNQ9UBH0 155 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 ADAMTS7Q9UKP4 1686 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 SMIM6P0DI80 62 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 ZNF250P15622 560 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 ID4P47928 161 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 TM4SF20Q53R12 229 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 ASCL5Q7RTU5 278 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 CA10Q9NS85 328 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms