RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 PFN1P07737 140 aaKnown RBP11.67□□□□□ -0.54
USP49-201ENST00000373006 Q6ZVH6 145 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 HAPLN4Q86UW8 402 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 ZNF525Q8N782 197 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 CPEB3Q8NE35 698 aaKnown RBP11.67□□□□□ -0.54
USP49-201ENST00000373006 FGF23Q9GZV9 251 aaPredicted RBP11.67□□□□□ -0.54
USP49-201ENST00000373006 MTCH1Q9NZJ7 389 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 C19orf25Q9UFG5 118 aaPredicted RBP11.67□□□□□ -0.54
USP49-201ENST00000373006 PPP5D1E7EU14 171 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 MKRN2OSH3BPM6 223 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 SYNGR2O43760 224 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 BMP5P22003 454 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 TDGF1P3P51864 188 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 TMEM241Q24JQ0 296 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 MRGPRGQ86SM5 289 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 GATAD1Q8WUU5 269 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 MBD3L1Q8WWY6 194 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 NOL4LQ96MY1 436 aaPredicted RBP11.67□□□□□ -0.54
USP49-201ENST00000373006 HIPK2Q9H2X6 1198 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 RNF24Q9Y225 148 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 CBY3A6NI87 242 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 LRRC3CA6NJW4 275 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
USP49-201ENST00000373006 CXCL13O43927 109 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 RPLP1P05386 114 aaKnown RBP11.67□□□□□ -0.54
USP49-201ENST00000373006 PAX1P15863 534 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 GALR1P47211 349 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 OR8G2PQ6IF36 304 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 PCSK4Q6UW60 755 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 OR4C12Q96R67 309 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 RAB40CQ96S21 281 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 SLC39A9Q9NUM3 307 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 PPP1R3CQ9UQK1 317 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 ATP23Q9Y6H3 246 aa11.67□□□□□ -0.54
USP49-201ENST00000373006 DUXBA0A1W2PPF3 345 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 IGKV1D-33P01593 117 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 IGKV1-33P01594 117 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 CARD18P57730 90 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 RAC1P63000 192 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 HLA-BQ31612 363 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 BSXQ3C1V8 233 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 OR51G1Q8NGK1 321 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 CTDSP1Q9GZU7 261 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 NAT8Q9UHE5 227 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 FREM1Q5H8C1 2179 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 A0A1W2PQM1 296 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 IGKV1-39P01597 117 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 IGKV1D-39P04432 117 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 PRDX4Q13162 271 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 RPP25LQ8N5L8 163 aaKnown RBP11.66□□□□□ -0.54
USP49-201ENST00000373006 DNAJC13O75165 2243 aa11.66□□□□□ -0.54
USP49-201ENST00000373006 MAP1BP46821 2468 aaKnown RBP11.66□□□□□ -0.54
USP49-201ENST00000373006 A0A096LPE4 126 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 A0A1W2PPZ6 126 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 CD300LBA8K4G0 201 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 H7BYZ3 331 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 SYNGR1O43759 233 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 KIR2DS4P43632 304 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 RPL23P62829 140 aaKnown RBP11.65□□□□□ -0.54
USP49-201ENST00000373006 GNB2P62879 340 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 KIR2DS1Q14954 304 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 PCOLCEQ15113 449 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 IGFBP7Q16270 282 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 ZDHHC23Q8IYP9 409 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 CPT1CQ8TCG5 803 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 P2RX4Q99571 388 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 ACTR3CQ9C0K3 210 aaPredicted RBP11.65□□□□□ -0.54
USP49-201ENST00000373006 OCIAD1Q9NX40 245 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 RPS16P62249 146 aaKnown RBP11.65□□□□□ -0.54
USP49-201ENST00000373006 CCL7P80098 99 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 MEF2BQ02080 365 aaPredicted RBP11.65□□□□□ -0.54
USP49-201ENST00000373006 LRRC75BQ2VPJ9 315 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 TDRG1Q3Y452 100 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 ABLIM2Q6H8Q1 611 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 C11orf42Q8N5U0 333 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 RNASEH2CQ8TDP1 164 aaKnown RBP11.65□□□□□ -0.54
USP49-201ENST00000373006 OR5B12Q96R08 314 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 SLC25A22Q9H936 323 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 OR1A1Q9P1Q5 309 aa11.65□□□□□ -0.54
USP49-201ENST00000373006 A0A0G2JMM0 328 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 A0A1W2PPB8 328 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 A0A1W2PRS3 328 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 KIR3DP1A8MWS1 328 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 FGF5P12034 268 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 CLDN15P56746 228 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 RAC3P60763 192 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 FGF12P61328 243 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 C16orf54Q6UWD8 224 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 SGCZQ96LD1 299 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 TBX15Q96SF7 602 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 FOXJ2Q9P0K8 574 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 OR2W1Q9Y3N9 320 aa11.65□□□□□ -0.55
USP49-201ENST00000373006 RBM7Q9Y580 266 aaKnown RBP11.65□□□□□ -0.55
USP49-201ENST00000373006 NBEAQ8NFP9 2946 aa11.64□□□□□ -0.55
USP49-201ENST00000373006 SRFP11831 508 aa11.64□□□□□ -0.55
USP49-201ENST00000373006 DEFA4P12838 97 aa11.64□□□□□ -0.55
USP49-201ENST00000373006 TMEM41BQ5BJD5 291 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms