RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 WIPI2Q9Y4P8 454 aa13.37□□□□□ -0.27
C9orf78-201ENST00000372447 CCDC168Q8NDH2 2452 aa13.37□□□□□ -0.27
C9orf78-201ENST00000372447 CYSRT1A8MQ03 144 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 NPIPB11E5RHQ5 1161 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 HSD17B6O14756 317 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 DEDDO75618 318 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 SMCO1Q147U7 214 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 FOXRED2Q8IWF2 684 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 CMTM1Q8IZ96 169 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 ITLN1Q8WWA0 313 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 IL1F10Q8WWZ1 152 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 MEGF10Q96KG7 1140 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 TMEM222Q9H0R3 208 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 SLC25A32Q9H2D1 315 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 SAP30LQ9HAJ7 183 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 MBNL3Q9NUK0 354 aaKnown RBP13.36□□□□□ -0.27
C9orf78-201ENST00000372447 TMED3Q9Y3Q3 217 aa13.36□□□□□ -0.27
C9orf78-201ENST00000372447 TRAV39A0A0B4J263 110 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 hCG_1807616A0A1W2PRN6 198 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 PSPNO60542 156 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 CD200P41217 278 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 TMEM268Q5VZI3 342 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 PDZD9Q8IXQ8 264 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 STOML3Q8TAV4 291 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 CXorf58Q96LI9 332 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 EGLN1Q9GZT9 426 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 MED9Q9NWA0 146 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 UBE2J1Q9Y385 318 aaPredicted RBP13.35□□□□□ -0.27
C9orf78-201ENST00000372447 LYNX1G3V0Z9 82 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 LYNX1P0DP58 116 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 COL8A2P25067 703 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 SMIM21Q3B7S5 101 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 TGIF2LYQ8IUE0 185 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 LRRC75A-AS1Q8N1F1 130 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 SLC35G3Q8N808 338 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 TMEM56Q96MV1 263 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 SHARPINQ9H0F6 387 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 OR1A1Q9P1Q5 309 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 TMEM56-RWDD3S4R434 201 aa13.35□□□□□ -0.27
C9orf78-201ENST00000372447 TMEM30CPA0ZSE6 113 aa13.34□□□□□ -0.27
C9orf78-201ENST00000372447 PTBP3O95758 552 aaKnown RBP13.34□□□□□ -0.27
C9orf78-201ENST00000372447 SCGB1D2O95969 90 aa13.34□□□□□ -0.27
C9orf78-201ENST00000372447 MBPP02686 304 aaPredicted RBP13.34□□□□□ -0.27
C9orf78-201ENST00000372447 DAOP14920 347 aa13.34□□□□□ -0.27
C9orf78-201ENST00000372447 TNFRSF1AP19438 455 aa13.34□□□□□ -0.27
C9orf78-201ENST00000372447 HOXA4Q00056 320 aaPredicted RBP13.34□□□□□ -0.27
C9orf78-201ENST00000372447 TESK1Q15569 626 aa13.34□□□□□ -0.27
C9orf78-201ENST00000372447 HMGN3Q15651 99 aa13.34□□□□□ -0.27
C9orf78-201ENST00000372447 ZNF695Q8IW36 515 aa13.34□□□□□ -0.27
C9orf78-201ENST00000372447 PRR18Q8N4B5 295 aa13.34□□□□□ -0.27
C9orf78-201ENST00000372447 GCM1Q9NP62 436 aa13.34□□□□□ -0.27
C9orf78-201ENST00000372447 CYTL1Q9NRR1 136 aa13.34□□□□□ -0.27
C9orf78-201ENST00000372447 LSM5Q9Y4Y9 91 aaKnown RBP13.34□□□□□ -0.27
C9orf78-201ENST00000372447 IGHV1-69-2A0A0G2JMI3 117 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.33□□□□□ -0.28
C9orf78-201ENST00000372447 IFNL4K9M1U5 179 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 PGLYRP1O75594 196 aaPredicted RBP13.33□□□□□ -0.28
C9orf78-201ENST00000372447 HKR1P10072 659 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 TPT1P13693 172 aaKnown RBP13.33□□□□□ -0.28
C9orf78-201ENST00000372447 S100GP29377 79 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 GATA4P43694 442 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 AANATQ16613 207 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 FAM74A1Q5RGS3 127 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 SLC35E4Q6ICL7 350 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 ZNF525Q8N782 197 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 BVESQ8NE79 360 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 OR10V1Q8NGI7 309 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 LRRC29Q8WV35 223 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 GPHA2Q96T91 129 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 TAF9BQ9HBM6 251 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 BARX1Q9HBU1 254 aaPredicted RBP13.33□□□□□ -0.28
C9orf78-201ENST00000372447 ZFP57Q9NU63 452 aa13.33□□□□□ -0.28
C9orf78-201ENST00000372447 K7EPK0 472 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 HSPA12AO43301 675 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 CDS2O95674 445 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 UCP1P25874 307 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 TOR2AQ5JU69 321 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 MOGAT3Q86VF5 341 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 SELENOHQ8IZQ5 122 aaKnown RBP13.32□□□□□ -0.28
C9orf78-201ENST00000372447 FAM71E2Q8N5Q1 922 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 OR52M1Q8NGK5 317 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 REG4Q9BYZ8 158 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 KCNIP1Q9NZI2 227 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 PFDN2Q9UHV9 154 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 PPP1R3CQ9UQK1 317 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 MAP1AP78559 2803 aaPredicted RBP13.32□□□□□ -0.28
C9orf78-201ENST00000372447 CHD3Q12873 2000 aaKnown RBP13.32□□□□□ -0.28
C9orf78-201ENST00000372447 H0Y980 276 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 I3L521 148 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 TNFSF12O43508 249 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 RPL12P30050 165 aaKnown RBP13.32□□□□□ -0.28
C9orf78-201ENST00000372447 MRPS11P82912 194 aaKnown RBP13.32□□□□□ -0.28
C9orf78-201ENST00000372447 BAP18Q8IXM2 172 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 OR10Z1Q8NGY1 313 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 CCL17Q92583 94 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 FOXC2Q99958 501 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 ZC4H2Q9NQZ6 224 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 SDHAF2Q9NX18 166 aa13.32□□□□□ -0.28
C9orf78-201ENST00000372447 PRRC2AP48634 2157 aaKnown RBP13.31□□□□□ -0.28
C9orf78-201ENST00000372447 DUXBA0A1W2PPF3 345 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms