RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CLN8Q9UBY8 286 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 COX7A1P24310 79 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 SCN7AQ01118 1682 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 CADM4Q8NFZ8 388 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 TNFSF18Q9UNG2 199 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 RABAC1Q9UI14 185 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 IGKV3OR2-268A0A0C4DH90 116 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 KIAA1644Q3SXP7 199 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 TMEFF2Q9UIK5 374 aaPredicted RBP13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 HYAL3O43820 417 aaPredicted RBP13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 HDGFL3Q9Y3E1 203 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 ID1P41134 155 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 NXPH1P58417 271 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 SNRPCP09234 159 aaKnown RBP13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 TSPAN32Q96QS1 320 aa13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 RBM38Q9H0Z9 239 aaKnown RBP13.47□□□□□ -0.25
GTF3C4-201ENST00000372146 IGHV3-21A0A0B4J1V1 117 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 SS18L1O75177 396 aaPredicted RBP13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 EAF1Q96JC9 268 aaPredicted RBP13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 H3BUT2 72 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 PRRG2O14669 202 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 ARL14EPLP0DKL9 152 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 VDAC1P21796 283 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 GLIPR1P48060 266 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 SLC25A1P53007 311 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 PRR14LQ5THK1 2151 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 FMODQ06828 376 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 GALNT14Q96FL9 552 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 PIMREGQ9BSJ6 248 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 GHITMQ9H3K2 345 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 TMEM170BQ5T4T1 132 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 DPH3Q96FX2 82 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 OR8B2Q96RD0 313 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 UPK1AO00322 258 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 TMPRSS2O15393 492 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 PPIHO43447 177 aaKnown RBP13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 DYNLRB2Q8TF09 96 aa13.46□□□□□ -0.25
GTF3C4-201ENST00000372146 SUMO2P61956 95 aaKnown RBP13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 NKG7Q16617 165 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 KIRREL2Q6UWL6 708 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 WFDC3Q8IUB2 231 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 QTRT1Q9BXR0 403 aaKnown RBP13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 SFTA2Q6UW10 78 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 ZNF562Q6V9R5 426 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 RND1Q92730 232 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 ATAD5Q96QE3 1844 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 A0A1B0GW15 77 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 OR2A4O95047 310 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 PSG2P11465 335 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 MRPL52Q86TS9 123 aaKnown RBP13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 OR2A7Q96R45 310 aa13.46□□□□□ -0.26
GTF3C4-201ENST00000372146 CEACAM16Q2WEN9 425 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 KCNS1Q96KK3 526 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 C18orf15Q96N68 181 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 TMUB1Q9BVT8 246 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 SHANK1Q9Y566 2161 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 DOCK1Q14185 1865 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 HOXD4P09016 255 aaPredicted RBP13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 RAC3P60763 192 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 SLC23A3Q6PIS1 610 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 TCF24Q7RTU0 167 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 VSTM2AQ8TAG5 236 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 ITGB4P16144 1822 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 HSPB1P04792 205 aaKnown RBP13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 FRG2CA6NGY1 282 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 SRSF5Q13243 272 aaKnown RBP13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 KLF9Q13886 244 aaPredicted RBP13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 RPS19BP1Q86WX3 136 aaKnown RBP13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 ZPBPQ9BS86 351 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 LOC105371267A0A1B0GV96 52 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 WDR54Q9H977 334 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 ZDHHC8Q9ULC8 765 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 OR51B2Q9Y5P1 312 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 H0YL77 283 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 ZNF774Q6NX45 483 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 NT5CQ8TCD5 201 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 MRPL24Q96A35 216 aaKnown RBP13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 PRF1P14222 555 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 PRDX2P32119 198 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 C8orf44Q96CB5 159 aa13.45□□□□□ -0.26
GTF3C4-201ENST00000372146 PPIAL4DF5H284 164 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 PPYP01298 95 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 MYOGP15173 224 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 TGIF1Q15583 401 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 A0A1B0GTH9 108 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 OR11H12B2RN74 326 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 ERVH48-1M5A8F1 160 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 CFDP00746 253 aaPredicted RBP13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 CBLN1P23435 193 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 OR11H1Q8NG94 326 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 OR11H2Q8NH07 326 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 CCL17Q92583 94 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 TLNRD1Q9H1K6 362 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 GPR35Q9HC97 309 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 SIRT5Q9NXA8 310 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 HYAL1Q12794 435 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 RTL10Q7L3V2 364 aa13.44□□□□□ -0.26
GTF3C4-201ENST00000372146 DOCK4Q8N1I0 1966 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms