RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 OR5AC2Q9NZP5 309 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 NOTCH1P46531 2555 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 MSGN1A6NI15 193 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 ST8SIA5O15466 376 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 PPIHO43447 177 aaKnown RBP12.5□□□□□ -0.41
LMO4-201ENST00000370542 SLC16A7O60669 478 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 DEDDO75618 318 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 PMP2P02689 132 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 CST2P09228 141 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 H2BFMP0C1H6 154 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 NQO2P16083 231 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 HIST1H1DP16402 221 aaKnown RBP12.5□□□□□ -0.41
LMO4-201ENST00000370542 FCGR2CP31995 323 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 APLNRP35414 380 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 SULT1A1P50225 295 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 CCL8P80075 99 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 FMODQ06828 376 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 HIST2H3PS2Q5TEC6 136 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 ZNF529Q6P280 563 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 OR4D6Q8NGJ1 314 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 OR51F2Q8NH61 342 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 TMEM230Q96A57 120 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 GINS3Q9BRX5 216 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 CNTD2Q9H8S5 307 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 SPACA1Q9HBV2 294 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 MRPL22Q9NWU5 206 aaKnown RBP12.5□□□□□ -0.41
LMO4-201ENST00000370542 GAR1Q9NY12 217 aaKnown RBP12.5□□□□□ -0.41
LMO4-201ENST00000370542 WNK2Q9Y3S1 2297 aa12.5□□□□□ -0.41
LMO4-201ENST00000370542 TMEM269A0A1B0GVZ9 245 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 A0A1W2PPH5 198 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 A6NLC8 198 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 UMAD1C9J7I0 102 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 H7C1C5 153 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 GPR137BO60478 399 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 VSIG8P0DPA2 414 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 AMY2BP19961 511 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 SRP14P37108 136 aaKnown RBP12.49□□□□□ -0.41
LMO4-201ENST00000370542 CAMLGP49069 296 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 LCN6P62502 163 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 ALKBH6Q3KRA9 238 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 ZNF718Q3SXZ3 478 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 HEPN1Q6WQI6 88 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 C1orf229Q6ZS94 237 aaPredicted RBP12.49□□□□□ -0.41
LMO4-201ENST00000370542 CCDC54Q8NEL0 328 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 SECTM1Q8WVN6 248 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 EDARADDQ8WWZ3 215 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 OR2H1Q9GZK4 316 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 WNT5BQ9H1J7 359 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
LMO4-201ENST00000370542 IGHV1-69-2A0A0G2JMI3 117 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 OR2C1O95371 312 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 CTSDP07339 412 aaPredicted RBP12.48□□□□□ -0.41
LMO4-201ENST00000370542 ZNF20P17024 532 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 RBP2P50120 134 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 S100A10P60903 97 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 UNC119Q13432 240 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 KIAA0141Q14154 515 aaPredicted RBP12.48□□□□□ -0.41
LMO4-201ENST00000370542 SLC9A3R2Q15599 337 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 SGPP2Q8IWX5 399 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 GVQW1Q8N7I0 195 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 SEMA6DQ8NFY4 1073 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 OR51A2Q8NGJ7 313 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 AKR7LQ8NHP1 331 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 KLF14Q8TD94 323 aaPredicted RBP12.48□□□□□ -0.41
LMO4-201ENST00000370542 GTF3AQ92664 365 aaKnown RBP12.48□□□□□ -0.41
LMO4-201ENST00000370542 RTBDNQ9BSG5 229 aaPredicted RBP12.48□□□□□ -0.41
LMO4-201ENST00000370542 CHST5Q9GZS9 411 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 OR51B6Q9H340 312 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 ZNF665Q9H7R5 613 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 ZMAT3Q9HA38 289 aaKnown RBP12.48□□□□□ -0.41
LMO4-201ENST00000370542 C19orf12Q9NSK7 152 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 FBXL17Q9UF56 701 aa12.48□□□□□ -0.41
LMO4-201ENST00000370542 NBEAL2Q6ZNJ1 2754 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 C5orf49A4QMS7 147 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 B4DEV8 164 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 CDC14BO60729 498 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 GPANK1O95872 356 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 IGHV1-46P01743 117 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 CD55P08174 381 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 OR8U9P0C7N5 309 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 COX5BP10606 129 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 ZNF93P35789 620 aaPredicted RBP12.47□□□□□ -0.41
LMO4-201ENST00000370542 GNALP38405 381 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 MPV17P39210 176 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 P2RY1P47900 373 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 PCBD1P61457 104 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 ENDOGQ14249 297 aaKnown RBP12.47□□□□□ -0.41
LMO4-201ENST00000370542 IL13RA2Q14627 380 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 IAH1Q2TAA2 248 aaPredicted RBP12.47□□□□□ -0.41
LMO4-201ENST00000370542 MIDNQ504T8 468 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 REC114Q7Z4M0 266 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 OR8U1Q8NH10 309 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 SGMS2Q8NHU3 365 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 SLC25A40Q8TBP6 338 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 RNF133Q8WVZ7 376 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 GAL3ST1Q99999 423 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 OR2J1Q9GZK6 312 aa12.47□□□□□ -0.41
LMO4-201ENST00000370542 EIF5A2Q9GZV4 153 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms