RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 FNDC4Q9H6D8 234 aaPredicted RBP4.32□□□□□ -1.72
UBE3D-202ENST00000369746 PATZ1Q9HBE1 687 aaKnown RBP4.32□□□□□ -1.72
UBE3D-202ENST00000369746 GOLGA2P5Q9HBQ8 144 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 CISD1Q9NZ45 108 aaKnown RBP4.32□□□□□ -1.72
UBE3D-202ENST00000369746 FIS1Q9Y3D6 152 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 TIMM13Q9Y5L4 95 aaPredicted RBP4.32□□□□□ -1.72
UBE3D-202ENST00000369746 CFAP54Q96N23 3096 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 NUP210LQ5VU65 1888 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 FBN3Q75N90 2809 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 CCL24O00175 119 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 STC2O76061 302 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 ZNF682O95780 498 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 GABRA3P34903 492 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 PPICP45877 212 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 GPR6P46095 362 aaPredicted RBP4.31□□□□□ -1.72
UBE3D-202ENST00000369746 OR3A4PP47883 348 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 PTH2RP49190 550 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 DHRS2Q13268 280 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 TGIF1Q15583 401 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 WDR82Q6UXN9 313 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 NEGR1Q7Z3B1 354 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 OR8I2Q8N0Y5 310 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 CFAP52Q8N1V2 620 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 ADAD2Q8NCV1 583 aaKnown RBP4.31□□□□□ -1.72
UBE3D-202ENST00000369746 GALMQ96C23 342 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 PGLYRP2Q96PD5 576 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 TSPAN32Q96QS1 320 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 VAMP8Q9BV40 100 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 A4GALTQ9NPC4 353 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 AP5S1Q9NUS5 200 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 IL36GQ9NZH8 169 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 LSM4Q9Y4Z0 139 aaKnown RBP4.31□□□□□ -1.72
UBE3D-202ENST00000369746 TMEM189A5PLL7 270 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 LRRC3CA6NJW4 275 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 FOXI3A8MTJ6 420 aaPredicted RBP4.31□□□□□ -1.72
UBE3D-202ENST00000369746 P2RX6O15547 441 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 JTBO76095 146 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 ZNF205O95201 554 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 OPN1SWP03999 348 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 HSPB1P04792 205 aaKnown RBP4.31□□□□□ -1.72
UBE3D-202ENST00000369746 SEC11BP0C7V7 166 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 LIMS3P0CW19 117 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 LIMS4P0CW20 117 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 SNRPBP14678 240 aaKnown RBP4.31□□□□□ -1.72
UBE3D-202ENST00000369746 CTRLP40313 264 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 CAV3P56539 151 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 SMIM11AP58511 58 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 CRADDP78560 199 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 PSG4Q00888 419 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 HHEXQ03014 270 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 DUSP2Q05923 314 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 C2orf68Q2NKX9 166 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 TRMT12Q53H54 448 aaKnown RBP4.31□□□□□ -1.72
UBE3D-202ENST00000369746 OPN5Q6U736 354 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 ZNF66Q6ZN08 573 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 OR1N2Q8NGR9 330 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 OR4X1Q8NH49 305 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 TMED6Q8WW62 240 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 PPCDCQ96CD2 204 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 SLAMF6Q96DU3 332 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 FAM46AQ96IP4 442 aaKnown RBP4.31□□□□□ -1.72
UBE3D-202ENST00000369746 UHRF2Q96PU4 802 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 TBX15Q96SF7 602 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 OR11A1Q9GZK7 315 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 LRTM1Q9HBL6 345 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 ZNF319Q9P2F9 582 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 ST6GALNAC2Q9UJ37 374 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 MCTS1Q9ULC4 181 aaKnown RBP4.31□□□□□ -1.72
UBE3D-202ENST00000369746 AK6Q9Y3D8 172 aaKnown RBP4.31□□□□□ -1.72
UBE3D-202ENST00000369746 DMXL1Q9Y485 3027 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 ANKRD36A6QL64 1941 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 F5P12259 2224 aa4.31□□□□□ -1.72
UBE3D-202ENST00000369746 A0A1W2PRE2 83 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 GAGE12BA1L429 117 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 FRG2CA6NGY1 282 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 XKRYO14609 159 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 MSTNO14793 375 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 MPPED1O15442 326 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 IGHG3P01860 377 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 REG1AP05451 166 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 H1F0P07305 194 aaKnown RBP4.3□□□□□ -1.72
UBE3D-202ENST00000369746 LINC00032P0C843 101 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 ZNF17P17021 662 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 RPL35AP18077 110 aaKnown RBP4.3□□□□□ -1.72
UBE3D-202ENST00000369746 PGGT1BP53609 377 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 RAB38P57729 211 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 CTXN1P60606 82 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 PRR31Q5SQ13 230 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 C1orf189Q5VU69 101 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 Q6ZS92 163 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 FER1L6-AS1Q8NA97 138 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 SUMF2Q8NBJ7 301 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 ACVR1CQ8NER5 493 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 IMP4Q96G21 291 aaKnown RBP4.3□□□□□ -1.72
UBE3D-202ENST00000369746 ADTRPQ96IZ2 230 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 GNRHR2Q96P88 292 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 LINC00470Q9BZP3 86 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 TCEAL2Q9H3H9 227 aaPredicted RBP4.3□□□□□ -1.72
UBE3D-202ENST00000369746 EGLN3Q9H6Z9 239 aa4.3□□□□□ -1.72
UBE3D-202ENST00000369746 SLC7A10Q9NS82 523 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms