RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 DOCK11Q5JSL3 2073 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 IGLV3-32A0A0A0MS00 114 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 FGF5P12034 268 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 F2RP25116 425 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 FADS6Q8N9I5 356 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 SDSLQ96GA7 329 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 VPS25Q9BRG1 176 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 PLSCR2Q9NRY7 297 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 KIAA1324LA8MWY0 1029 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-201ENST00000369407 NUPR1O60356 82 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 PTTG1IPP53801 180 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 CEACAM16Q2WEN9 425 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 TMEM42Q69YG0 159 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 ERASQ7Z444 233 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 MRGPRGQ86SM5 289 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 TMEM256Q8N2U0 113 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 OR10V1Q8NGI7 309 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 RNASEH2CQ8TDP1 164 aaKnown RBP10.48□□□□□ -0.73
PHGDH-201ENST00000369407 DNASE2BQ8WZ79 361 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 SGCZQ96LD1 299 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 PARLQ9H300 379 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 OR1A1Q9P1Q5 309 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 PAM16Q9Y3D7 125 aa10.48□□□□□ -0.73
PHGDH-201ENST00000369407 MUC3AQ02505 3323 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 LOC102725191A0A1B0GVB3 256 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 ZIC3O60481 467 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 IGKV1-39P01597 117 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 IGKV1D-39P04432 117 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 CD82P27701 267 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 MEF2BQ02080 365 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-201ENST00000369407 OR8B8Q15620 311 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 DPPA3Q6W0C5 159 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 FOXL2NBQ6ZUU3 175 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 OR56B2PQ8NGI1 322 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 OR5D13Q8NGL4 314 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 ADGRG7Q96K78 797 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 IGHV3-64DA0A0J9YX35 117 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 CD300LBA8K4G0 201 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 C1QTNF9BB2RNN3 333 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 SYNGR2O43760 224 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 IGLV3-19P01714 112 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 TNFSF10P50591 281 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-201ENST00000369407 BEND2Q8NDZ0 799 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 MRPL30Q8TCC3 161 aaKnown RBP10.47□□□□□ -0.73
PHGDH-201ENST00000369407 MBD3L1Q8WWY6 194 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 IL22RA2Q969J5 263 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 CTDSP1Q9GZU7 261 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 LPAR2Q9HBW0 351 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 TMEM38BQ9NVV0 291 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 PTRH2Q9Y3E5 179 aaKnown RBP10.47□□□□□ -0.73
PHGDH-201ENST00000369407 TRAV34A0A0B4J273 112 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 ZNF816-ZNF321PA0A0X1KG74 233 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 CLEC18AA5D8T8 446 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 H0Y980 276 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 SYNGR1O43759 233 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 TMPRSS7Q7RTY8 843 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 CLEC18CQ8NCF0 446 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 OR1L6Q8NGR2 347 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 MTCH1Q9NZJ7 389 aa10.47□□□□□ -0.73
PHGDH-201ENST00000369407 RBM7Q9Y580 266 aaKnown RBP10.47□□□□□ -0.73
PHGDH-201ENST00000369407 DOCK7Q96N67 2140 aa10.46□□□□□ -0.73
PHGDH-201ENST00000369407 A0A096LPE4 126 aa10.46□□□□□ -0.73
PHGDH-201ENST00000369407 A0A1W2PPZ6 126 aa10.46□□□□□ -0.73
PHGDH-201ENST00000369407 PGPEP1LA6NFU8 196 aa10.46□□□□□ -0.73
PHGDH-201ENST00000369407 C2CD4DB7Z1M9 353 aa10.46□□□□□ -0.73
PHGDH-201ENST00000369407 CRYAAP02489 173 aa10.46□□□□□ -0.73
PHGDH-201ENST00000369407 OR2H1Q9GZK4 316 aa10.46□□□□□ -0.73
PHGDH-201ENST00000369407 KCNS2Q9ULS6 477 aa10.46□□□□□ -0.73
PHGDH-201ENST00000369407 MRPS18CQ9Y3D5 142 aaKnown RBP10.46□□□□□ -0.73
PHGDH-201ENST00000369407 A0A0U1RQK1 487 aa10.46□□□□□ -0.74
PHGDH-201ENST00000369407 NAPSAO96009 420 aa10.46□□□□□ -0.74
PHGDH-201ENST00000369407 TMEM41BQ5BJD5 291 aa10.46□□□□□ -0.74
PHGDH-201ENST00000369407 FAM78BQ5VT40 261 aa10.46□□□□□ -0.74
PHGDH-201ENST00000369407 ACSM6Q6P461 480 aa10.46□□□□□ -0.74
PHGDH-201ENST00000369407 PCSK4Q6UW60 755 aa10.46□□□□□ -0.74
PHGDH-201ENST00000369407 CYP2G1PQ6ZSU1 146 aa10.46□□□□□ -0.74
PHGDH-201ENST00000369407 RABEPKQ7Z6M1 372 aa10.46□□□□□ -0.74
PHGDH-201ENST00000369407 TMEM18Q96B42 140 aa10.46□□□□□ -0.74
PHGDH-201ENST00000369407 OR51I2Q9H344 312 aa10.46□□□□□ -0.74
PHGDH-201ENST00000369407 IGLV3-12A0A075B6K2 115 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 OR6C6A6NF89 314 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 TUSC2O75896 110 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 KBTBD11O94819 623 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 GCGP01275 180 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 IGKV1-5P01602 117 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 GLB1P16278 677 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 CARD18P57730 90 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 NXPH1P58417 271 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 ERVFC1-1P60608 527 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 LRRC75BQ2VPJ9 315 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 TDRG1Q3Y452 100 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 SPINK9Q5DT21 86 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 AAED1Q7RTV5 226 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 Q8NFD4 153 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 RAB40CQ96S21 281 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 FOXB1Q99853 325 aa10.45□□□□□ -0.74
PHGDH-201ENST00000369407 WDR61Q9GZS3 305 aaKnown RBP10.45□□□□□ -0.74
PHGDH-201ENST00000369407 POLR3KQ9Y2Y1 108 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-201ENST00000369407 FREM1Q5H8C1 2179 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms