RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 RSPO4Q2I0M5 234 aaPredicted RBP13.27□□□□□ -0.28
SEMA6C-202ENST00000368912 TRAF3IP2O43734 574 aaPredicted RBP13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 CRYBA4P53673 196 aa13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 EIF3IQ13347 325 aaKnown RBP13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 CALHM2Q9HA72 323 aa13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 A0A0U1RQK1 487 aa13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 CEBPZOSA8MTT3 80 aa13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 NUPR1O60356 82 aa13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 ARF6P62330 175 aa13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 NPEPL1Q8NDH3 523 aa13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 OR5AU1Q8NGC0 362 aa13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 FER1L6-AS2Q96M78 137 aa13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 C12orf49Q9H741 205 aa13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 RYDENQ9NUL5 291 aaKnown RBP13.27□□□□□ -0.29
SEMA6C-202ENST00000368912 PKDREJQ9NTG1 2253 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 APOBEC3AP31941 199 aaPredicted RBP13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 RBPJQ06330 500 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 SPOCK1Q08629 439 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 ATOH7Q8N100 152 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 OR2T10Q8NGZ9 312 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 TSPAN32Q96QS1 320 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 SMIM7Q9BQ49 75 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 LPAR5Q9H1C0 372 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 WFDC1Q9HC57 220 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 SLC33A1O00400 549 aaPredicted RBP13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 PATE4P0C8F1 98 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 PPP1R14AQ96A00 147 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 SLC25A44Q96H78 314 aaPredicted RBP13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 MANBALQ9NQG1 85 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 SLC17A2O00624 439 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 RBMXL2O75526 392 aaKnown RBP13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 MMP23AO75900 390 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 GLI4P10075 376 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 RAB9AP51151 201 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 MRPS34P82930 218 aaKnown RBP13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 PRAMEF5Q5TYX0 476 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 PRAMEF6Q5VXH4 476 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 PARLQ9H300 379 aa13.26□□□□□ -0.29
SEMA6C-202ENST00000368912 CADP27708 2225 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 PINLYPA6NC86 204 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 SDCBPO00560 298 aaPredicted RBP13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 DBHP09172 617 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 KRTCAP3Q53RY4 240 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 TEX43Q6ZNM6 134 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 Q6ZWC4 215 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 H1FNTQ75WM6 255 aaPredicted RBP13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 KLHDC1Q8N7A1 406 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 OR2V1Q8NHB1 315 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 RNF128Q8TEB7 428 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 SCNM1Q9BWG6 230 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 ELL3Q9HB65 397 aaPredicted RBP13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 Q9N2K0 584 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 CHCHD2Q9Y6H1 151 aaPredicted RBP13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 LYPD3O95274 346 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 H2BFMP0C1H6 154 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 WT1P19544 449 aaPredicted RBP13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 RTP5Q14D33 572 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 OR2M3Q8NG83 312 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 ABHD6Q9BV23 337 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 MAGT1Q9H0U3 335 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 DEPPQ9NTK1 212 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 SLC45A2Q9UMX9 530 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 ABCA4P78363 2273 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 EML6Q6ZMW3 1958 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 GCH1P30793 250 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 LCN15Q6UWW0 184 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 SIGLECL1Q8N7X8 197 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 SCGB3A2Q96PL1 93 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 CTDSP1Q9GZU7 261 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 OR51I2Q9H344 312 aa13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 ZNF703Q9H7S9 590 aaPredicted RBP13.25□□□□□ -0.29
SEMA6C-202ENST00000368912 DCHS1Q96JQ0 3298 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 CLEC18AA5D8T8 446 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 EFNA2O43921 213 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 CTLA4P16410 223 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 GNB3P16520 340 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 GFRA1P56159 465 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 PRSS57Q6UWY2 283 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 CLEC18CQ8NCF0 446 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 FDCSPQ8NFU4 85 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 KCNE4Q8WWG9 221 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 PSMF1Q92530 271 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 LRP12Q9Y561 859 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 HYPMO75409 117 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 ALOX5APP20292 161 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 OR8I2Q8N0Y5 310 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 FRRS1LQ9P0K9 344 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 NSG2Q9Y328 171 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 TMEM225BP0DP42 221 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 CLDN15P56746 228 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 PAX2Q02962 417 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 KLHL24Q6TFL4 600 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 OR4D6Q8NGJ1 314 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 WNT10AQ9GZT5 417 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 RNF115Q9Y4L5 304 aa13.24□□□□□ -0.29
SEMA6C-202ENST00000368912 GTF3C1Q12789 2109 aa13.23□□□□□ -0.29
SEMA6C-202ENST00000368912 F5H5K5 113 aa13.23□□□□□ -0.29
SEMA6C-202ENST00000368912 K7N7A8 449 aa13.23□□□□□ -0.29
SEMA6C-202ENST00000368912 ATP6V0CP27449 155 aa13.23□□□□□ -0.29
SEMA6C-202ENST00000368912 ARFRP1Q13795 201 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms