RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CMTM1Q8IZ96 169 aa10.12□□□□□ -0.79
TUBE1-202ENST00000368662 AKR1E2Q96JD6 320 aa10.12□□□□□ -0.79
TUBE1-202ENST00000368662 RSRP1Q9BUV0 290 aa10.12□□□□□ -0.79
TUBE1-202ENST00000368662 SLC5A7Q9GZV3 580 aa10.12□□□□□ -0.79
TUBE1-202ENST00000368662 GHITMQ9H3K2 345 aa10.12□□□□□ -0.79
TUBE1-202ENST00000368662 C5orf66Q9H5L9 145 aa10.12□□□□□ -0.79
TUBE1-202ENST00000368662 SESN1Q9Y6P5 492 aa10.12□□□□□ -0.79
TUBE1-202ENST00000368662 A0A087X0M5 115 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 A0A1B0GX30 115 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 IL5P05113 134 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 OR8U9P0C7N5 309 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 LCN2P80188 198 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 MSMO1Q15800 293 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 TMEM128Q5BJH2 165 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 METTL11BQ5VVY1 283 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 C11orf88Q6PI97 169 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 BTNL3Q6UXE8 466 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 CCDC71LQ8N9Z2 235 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 OR8U1Q8NH10 309 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 GPN1Q9HCN4 374 aaPredicted RBP10.11□□□□□ -0.79
TUBE1-202ENST00000368662 ONECUT1Q9UBC0 465 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 KPTNQ9Y664 436 aa10.11□□□□□ -0.79
TUBE1-202ENST00000368662 MAP1AP78559 2803 aaPredicted RBP10.11□□□□□ -0.79
TUBE1-202ENST00000368662 IGKV1D-13A0A0B4J2D9 117 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 IGHV2-70DA0A0C4DH43 119 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 VGLL3A8MV65 326 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 GPR31O00270 319 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 IGKV1-13P0DP09 117 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 ANXA7P20073 488 aaKnown RBP10.1□□□□□ -0.79
TUBE1-202ENST00000368662 GNRHRP30968 328 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 ERVFRD-1P60508 538 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 GLDNQ6ZMI3 551 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-202ENST00000368662 C11orf42Q8N5U0 333 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 ZNF645Q8N7E2 425 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 C8orf31Q8N9H6 132 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 ZBTB34Q8NCN2 500 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 AGMATQ9BSE5 352 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 RTBDNQ9BSG5 229 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-202ENST00000368662 ABHD14AQ9BUJ0 271 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 METTL8Q9H825 291 aaKnown RBP10.1□□□□□ -0.79
TUBE1-202ENST00000368662 CSMD1Q96PZ7 3565 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 MMP23AO75900 390 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 OR4E1P0C645 316 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 AKR1C4P17516 323 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 PIGPP57054 158 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 PAX2Q02962 417 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 LOXL1Q08397 574 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-202ENST00000368662 C4orf46Q504U0 113 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 ZNF818PQ6ZRF7 136 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 BVESQ8NE79 360 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 DACT3Q96B18 629 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-202ENST00000368662 FOXC2Q99958 501 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 OR2D2Q9H210 308 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 TMEM133Q9H2Q1 129 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 SLC2A9Q9NRM0 540 aa10.1□□□□□ -0.79
TUBE1-202ENST00000368662 FAM157AC9JC47 383 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 PI3P19957 117 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 RND3P61587 244 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 DHODHQ02127 395 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 SLC25A48Q6ZT89 311 aaKnown RBP10.09□□□□□ -0.79
TUBE1-202ENST00000368662 ZNF439Q8NDP4 499 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 TNFRSF14Q92956 283 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 PARP12Q9H0J9 701 aaKnown RBP10.09□□□□□ -0.79
TUBE1-202ENST00000368662 CCL28Q9NRJ3 127 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 KCNS2Q9ULS6 477 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 PSG11Q9UQ72 335 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 CREBBPQ92793 2442 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 YLPM1P49750 1951 aaKnown RBP10.09□□□□□ -0.79
TUBE1-202ENST00000368662 C7orf66A4D0T2 115 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 SNRPGP15A8MWD9 76 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 B4DSR2 109 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 CREBL2O60519 120 aaPredicted RBP10.09□□□□□ -0.79
TUBE1-202ENST00000368662 CD34P28906 385 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 ARF6P62330 175 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 SGPP2Q8IWX5 399 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 LINC00311Q8N616 119 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 ADAD2Q8NCV1 583 aaKnown RBP10.09□□□□□ -0.79
TUBE1-202ENST00000368662 OR9G1Q8NH87 305 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 RTN4IP1Q8WWV3 396 aaPredicted RBP10.09□□□□□ -0.79
TUBE1-202ENST00000368662 C1orf159Q96HA4 380 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 SUCNR1Q9BXA5 334 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 BEX2Q9BXY8 128 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 REG4Q9BYZ8 158 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 UNKLQ9H9P5 680 aaKnown RBP10.09□□□□□ -0.79
TUBE1-202ENST00000368662 BEX1Q9HBH7 125 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 PIPOXQ9P0Z9 390 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 ZNF221Q9UK13 617 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 GAB2Q9UQC2 676 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 KCNIP3Q9Y2W7 256 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 CCDC168Q8NDH2 2452 aa10.09□□□□□ -0.79
TUBE1-202ENST00000368662 MED13LQ71F56 2210 aa10.08□□□□□ -0.8
TUBE1-202ENST00000368662 A0A096LNT2 108 aa10.08□□□□□ -0.8
TUBE1-202ENST00000368662 HSD17B6O14756 317 aa10.08□□□□□ -0.8
TUBE1-202ENST00000368662 ST8SIA5O15466 376 aa10.08□□□□□ -0.8
TUBE1-202ENST00000368662 HLA-AP01891 365 aaKnown RBP10.08□□□□□ -0.8
TUBE1-202ENST00000368662 ANXA3P12429 323 aa10.08□□□□□ -0.8
TUBE1-202ENST00000368662 PRTN3P24158 256 aa10.08□□□□□ -0.8
TUBE1-202ENST00000368662 GPR12P47775 334 aa10.08□□□□□ -0.8
TUBE1-202ENST00000368662 ZNF134P52741 427 aa10.08□□□□□ -0.8
TUBE1-202ENST00000368662 CT45A1Q5HYN5 189 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms