RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 C15orf40Q8WUR7 153 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 SNAPC3Q92966 411 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 AJUBAQ96IF1 538 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 CABLES2Q9BTV7 478 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 ABHD14AQ9BUJ0 271 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 RDH8Q9NYR8 311 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 DPM3Q9P2X0 92 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 KLK11Q9UBX7 282 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 RNF150Q9ULK6 438 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 AMMECR1Q9Y4X0 333 aaPredicted RBP11.26□□□□□ -0.61
TPM3-211ENST00000368531 TRBV6-7A0A0A0MS04 114 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 RBBP9O75884 186 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 PMP2P02689 132 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 NFYAP23511 347 aaPredicted RBP11.25□□□□□ -0.61
TPM3-211ENST00000368531 HLA-DMAP28067 261 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 CEACAM3P40198 252 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 OR3A3P47888 321 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 REG1BP48304 166 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 DIAPH2-AS1Q14236 149 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 PYDC2Q56P42 97 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 MINOS1Q5TGZ0 78 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 SLC25A48Q6ZT89 311 aaKnown RBP11.25□□□□□ -0.61
TPM3-211ENST00000368531 CCDC190Q86UF4 302 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 ZNF418Q8TF45 676 aaPredicted RBP11.25□□□□□ -0.61
TPM3-211ENST00000368531 MALSU1Q96EH3 234 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 ABHD14BQ96IU4 210 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 SOSTQ9BQB4 213 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 C11orf54Q9H0W9 315 aaPredicted RBP11.25□□□□□ -0.61
TPM3-211ENST00000368531 RBM7Q9Y580 266 aaKnown RBP11.25□□□□□ -0.61
TPM3-211ENST00000368531 MINOS1-NBL1R4GNA1 71 aa11.25□□□□□ -0.61
TPM3-211ENST00000368531 GABARAPH6UMI1 98 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 TPPPO94811 219 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 CTXN2P0C2S0 81 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 RCVRNP35243 200 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 RFX2P48378 723 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 RAB13P51153 203 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 SRSF2Q01130 221 aaKnown RBP11.24□□□□□ -0.61
TPM3-211ENST00000368531 BAMBIQ13145 260 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 Q3ZCU0 254 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 SPANXN2Q5MJ10 180 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 TPTE2P1Q5T6R2 138 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 LYSMD2Q8IV50 215 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 LINC00311Q8N616 119 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 OR5AP2Q8NGF4 316 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 OR5H2Q8NGV7 314 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 TOMM40LQ969M1 308 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 RPEQ96AT9 228 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 CREB3L1Q96BA8 519 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 SSX3Q99909 188 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 NECAP2Q9NVZ3 263 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 EHFQ9NZC4 300 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 RABL2AQ9UBK7 228 aaPredicted RBP11.24□□□□□ -0.61
TPM3-211ENST00000368531 ANAPC10Q9UM13 185 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 RABL2BQ9UNT1 228 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 V9GYH0 126 aa11.24□□□□□ -0.61
TPM3-211ENST00000368531 LY6LH3BQJ8 138 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
TPM3-211ENST00000368531 OR8U9P0C7N5 309 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 OR5H8P0DN80 308 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 NAT1P18440 290 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 IL3RAP26951 378 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 CDK10Q15131 360 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 Q6YL49 198 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 H1FOOQ8IZA3 346 aaPredicted RBP11.23□□□□□ -0.61
TPM3-211ENST00000368531 C8orf31Q8N9H6 132 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 OR8U1Q8NH10 309 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 SMIM4Q8WVI0 70 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 EDARADDQ8WWZ3 215 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 PTTG2Q9NZH5 202 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 MTFP1Q9UDX5 166 aa11.23□□□□□ -0.61
TPM3-211ENST00000368531 TEP1Q99973 2627 aaKnown RBP11.22□□□□□ -0.61
TPM3-211ENST00000368531 M0QYG6 137 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 HSD17B6O14756 317 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 CTDSPLO15194 276 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 TCF21O43680 179 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 IFNA2P01563 188 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 IGHV4-59P01825 116 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 CD24P25063 80 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 FCGR2CP31995 323 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 HRH1P35367 487 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 RAB7AP51149 207 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 TAS2R46P59540 309 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 ACTBP60709 375 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 ACTG1P63261 375 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
TPM3-211ENST00000368531 ZNF79Q15937 498 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 LY6G6FQ5SQ64 297 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 MOB3BQ86TA1 216 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 ODF3L1Q8IXM7 274 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 IFI27L2Q9H2X8 130 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 ABCB10Q9NRK6 738 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 ZNF221Q9UK13 617 aa11.22□□□□□ -0.61
TPM3-211ENST00000368531 SAA2-SAA4A0A096LPE2 208 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 IGHV3-72A0A0B4J1Y9 119 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 DNAJC9-AS1A6NH13 148 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 ZNF736B4DX44 427 aaPredicted RBP11.21□□□□□ -0.61
TPM3-211ENST00000368531 H3BUX3 64 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 LANCL1O43813 399 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms