RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 M0R036 132 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 ITGB1BP1O14713 200 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 RAB29O14966 203 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 PPIHO43447 177 aaKnown RBP8.61□□□□□ -1.03
TPM3-209ENST00000368527 TNFSF12O43508 249 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 CST7O76096 145 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 CLDN14O95500 239 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 CELA3BP08861 270 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 OMGP23515 440 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 MAS1LP35410 378 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 PLA2G5P39877 138 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 KIR2DS2P43631 304 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 PMP22Q01453 160 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 PNRC1Q12796 327 aaPredicted RBP8.61□□□□□ -1.03
TPM3-209ENST00000368527 TIMM23BQ5SRD1 257 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 WDR82Q6UXN9 313 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 GCNT2Q8N0V5 402 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 C9orf106Q8NAJ2 232 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 MBD3L1Q8WWY6 194 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 MALSU1Q96EH3 234 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 MRPL37Q9BZE1 423 aaKnown RBP8.61□□□□□ -1.03
TPM3-209ENST00000368527 RPS10P5Q9NQ39 176 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 ZNF71Q9NQZ8 489 aaPredicted RBP8.61□□□□□ -1.03
TPM3-209ENST00000368527 SIRT7Q9NRC8 400 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 HSPB7Q9UBY9 170 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 PPP1R3CQ9UQK1 317 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 WDR87Q6ZQQ6 2873 aa8.61□□□□□ -1.03
TPM3-209ENST00000368527 IGHV2OR16-5A0A0B4J2B6 119 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 A6NLC8 198 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 COLCA2A8K830 154 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 C12orf77C9JDV5 145 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 SIGLEC5O15389 551 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 MLNRO43193 412 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 TGOLN2O43493 480 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 TMEM50AO95807 157 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 IGKV1-5P01602 117 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 IGLV2-14P01704 120 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 HBZP02008 142 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 CECR9P0C854 216 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 EPHA1P21709 976 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 PTAFRP25105 342 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 MPV17P39210 176 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 SELENOVP59797 346 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 UBE2KP61086 200 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 RPP30P78346 268 aaKnown RBP8.6□□□□□ -1.03
TPM3-209ENST00000368527 TNFRSF9Q07011 255 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 CR1LQ2VPA4 569 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 LRRC75BQ2VPJ9 315 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 ZNF585BQ52M93 769 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 AWAT1Q58HT5 328 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 SP5Q6BEB4 398 aaPredicted RBP8.6□□□□□ -1.03
TPM3-209ENST00000368527 CLEC9AQ6UXN8 241 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 SLC35E3Q7Z769 313 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 CENPVQ7Z7K6 275 aaPredicted RBP8.6□□□□□ -1.03
TPM3-209ENST00000368527 VASH2Q86V25 355 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 LILRB2Q8N423 598 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 FGFRL1Q8N441 504 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 SNX22Q96L94 193 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 TINAGQ9UJW2 476 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 JPT1Q9UK76 154 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 FBXO7Q9Y3I1 522 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 LAMA1P25391 3075 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 RTTNQ86VV8 2226 aa8.6□□□□□ -1.03
TPM3-209ENST00000368527 SHANK1Q9Y566 2161 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 C9JQL5 133 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 MGST3O14880 152 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 RBFOX2O43251 390 aaKnown RBP eCLIP8.59□□□□□ -1.03
TPM3-209ENST00000368527 CGAP01215 116 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 IGKV1-39P01597 117 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 IGHV3-13P01766 116 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 IGKV1D-39P04432 117 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 TIMP3P35625 211 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 OR3A1P47881 315 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 NOVA1P51513 510 aaKnown RBP8.59□□□□□ -1.03
TPM3-209ENST00000368527 RTP5Q14D33 572 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 KRTCAP3Q53RY4 240 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 TMEM41BQ5BJD5 291 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 KRBOX4Q5JUW0 171 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 SPSB3Q6PJ21 355 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 TMEM14EPQ6UXP3 125 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 RBMS3Q6XE24 437 aaKnown RBP8.59□□□□□ -1.03
TPM3-209ENST00000368527 MYPOPQ86VE0 399 aaPredicted RBP8.59□□□□□ -1.03
TPM3-209ENST00000368527 CXorf67Q86X51 503 aaPredicted RBP8.59□□□□□ -1.03
TPM3-209ENST00000368527 THNSL2Q86YJ6 484 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 C11orf53Q8IXP5 236 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 ZNF525Q8N782 197 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 TMEM217Q8N7C4 229 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 RXFP4Q8TDU9 374 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 STARD4Q96DR4 205 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 MUCL1Q96DR8 90 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 C14orf79Q96F83 325 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 CLCC1Q96S66 551 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 TCEAL7Q9BRU2 100 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 NIPSNAP3BQ9BS92 247 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 TMEM147Q9BVK8 224 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 SFXN3Q9BWM7 321 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 GAB2Q9UQC2 676 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 SLC25A15Q9Y619 301 aa8.59□□□□□ -1.03
TPM3-209ENST00000368527 IGHV1-18A0A0C4DH31 117 aa8.58□□□□□ -1.04
TPM3-209ENST00000368527 A0A0G2JRQ6 117 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms