RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CCDC22O60826 627 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 OR7C1O76099 320 aaPredicted RBP10.88□□□□□ -0.67
VAMP4-202ENST00000367740 HBZP02008 142 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 MT-ND4P03905 459 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 ISG15P05161 165 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 OR3A3P47888 321 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 TCTAP57738 103 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 NANOS2P60321 138 aaKnown RBP10.88□□□□□ -0.67
VAMP4-202ENST00000367740 ADARB1P78563 741 aaKnown RBP10.88□□□□□ -0.67
VAMP4-202ENST00000367740 GNMTQ14749 295 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 AADACL4Q5VUY2 407 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 OR5T1Q8NG75 326 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 NDE1Q9NXR1 346 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 SAA2-SAA4A0A096LPE2 208 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 SAA2P0DJI9 122 aaPredicted RBP10.87□□□□□ -0.67
VAMP4-202ENST00000367740 AADACP22760 399 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 TRIM25Q14258 630 aaKnown RBP10.87□□□□□ -0.67
VAMP4-202ENST00000367740 LINC01559Q495D7 138 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 MORN2Q502X0 79 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 NXNL2Q5VZ03 156 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 LPCAT4Q643R3 524 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 HS3ST5Q8IZT8 346 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 OR13C3Q8NGS6 347 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 OR2G2Q8NGZ5 317 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 GRPEL2Q8TAA5 225 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 C2CD4CQ8TF44 421 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 APLNQ9ULZ1 77 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 ST3GAL6Q9Y274 331 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 SELENOKQ9Y6D0 94 aa10.87□□□□□ -0.67
VAMP4-202ENST00000367740 DMBT1Q9UGM3 2413 aaPredicted RBP10.87□□□□□ -0.67
VAMP4-202ENST00000367740 BMPR1BO00238 502 aa10.86□□□□□ -0.67
VAMP4-202ENST00000367740 GABRPO00591 440 aa10.86□□□□□ -0.67
VAMP4-202ENST00000367740 GEMIN2O14893 280 aaKnown RBP10.86□□□□□ -0.67
VAMP4-202ENST00000367740 RBMXL2O75526 392 aaKnown RBP10.86□□□□□ -0.67
VAMP4-202ENST00000367740 CTRB1P17538 263 aa10.86□□□□□ -0.67
VAMP4-202ENST00000367740 RBM11P57052 281 aaKnown RBP10.86□□□□□ -0.67
VAMP4-202ENST00000367740 NANOS3P60323 173 aaKnown RBP10.86□□□□□ -0.67
VAMP4-202ENST00000367740 TP53I3Q53FA7 332 aa10.86□□□□□ -0.67
VAMP4-202ENST00000367740 CTRB2Q6GPI1 263 aa10.86□□□□□ -0.67
VAMP4-202ENST00000367740 SNAPC3Q92966 411 aa10.86□□□□□ -0.67
VAMP4-202ENST00000367740 TINAGL1Q9GZM7 467 aaPredicted RBP10.86□□□□□ -0.67
VAMP4-202ENST00000367740 ZNF556Q9HAH1 456 aa10.86□□□□□ -0.67
VAMP4-202ENST00000367740 FRRS1LQ9P0K9 344 aa10.86□□□□□ -0.67
VAMP4-202ENST00000367740 RCC2Q9P258 522 aaKnown RBP10.86□□□□□ -0.67
VAMP4-202ENST00000367740 METTL1Q9UBP6 276 aaKnown RBP10.86□□□□□ -0.67
VAMP4-202ENST00000367740 FBXL17Q9UF56 701 aa10.86□□□□□ -0.67
VAMP4-202ENST00000367740 GNG8Q9UK08 70 aa10.86□□□□□ -0.67
VAMP4-202ENST00000367740 A0A0B4J203 849 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 C2orf70A6NJV1 201 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 SULT1B1O43704 296 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 OR2T7P0C7T2 308 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 FOLR2P14207 255 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 PPP1CCP36873 323 aaKnown RBP10.85□□□□□ -0.67
VAMP4-202ENST00000367740 APOC4P55056 127 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 SSBP2P81877 361 aaPredicted RBP10.85□□□□□ -0.67
VAMP4-202ENST00000367740 RSU1Q15404 277 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 RBMS2Q15434 407 aaKnown RBP10.85□□□□□ -0.67
VAMP4-202ENST00000367740 NHLRC3Q5JS37 347 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 SYT6Q5T7P8 510 aaPredicted RBP10.85□□□□□ -0.67
VAMP4-202ENST00000367740 KCTD20Q7Z5Y7 419 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 TMEM61Q8N0U2 210 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 OR52B4Q8NGK2 314 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 NEK7Q8TDX7 302 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 TNFAIP8L1Q8WVP5 186 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 RAB9BQ9NP90 201 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 OR2S2Q9NQN1 319 aa10.85□□□□□ -0.67
VAMP4-202ENST00000367740 MBNL3Q9NUK0 354 aaKnown RBP10.85□□□□□ -0.67
VAMP4-202ENST00000367740 TECRQ9NZ01 308 aaKnown RBP10.85□□□□□ -0.67
VAMP4-202ENST00000367740 HTR3BO95264 441 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 FADS2O95864 444 aaKnown RBP10.84□□□□□ -0.67
VAMP4-202ENST00000367740 CST1P01037 141 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 IFNA4P05014 189 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 PRKACGP22612 351 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 PRDX6P30041 224 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 CRISP1P54107 249 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 EFNB1P98172 346 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 FXYD3Q14802 87 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 ATAD3CQ5T2N8 411 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 C6orf183Q5T699 404 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 FAM220AQ7Z4H9 259 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 OR10H4Q8NGA5 316 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 OR52L2PQ8NGH6 319 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 OR4K15Q8NH41 348 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 GHSRQ92847 366 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 MRPS24Q96EL2 167 aaKnown RBP10.84□□□□□ -0.67
VAMP4-202ENST00000367740 FAM192AQ9GZU8 254 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 H2AFY2Q9P0M6 372 aaPredicted RBP10.84□□□□□ -0.67
VAMP4-202ENST00000367740 TRAPPC2LQ9UL33 140 aa10.84□□□□□ -0.67
VAMP4-202ENST00000367740 OR5H14A6NHG9 310 aa10.83□□□□□ -0.68
VAMP4-202ENST00000367740 UBE2CO00762 179 aa10.83□□□□□ -0.68
VAMP4-202ENST00000367740 SLC22A1O15245 554 aa10.83□□□□□ -0.68
VAMP4-202ENST00000367740 RCC1P18754 421 aaPredicted RBP10.83□□□□□ -0.68
VAMP4-202ENST00000367740 ZNF85Q03923 595 aa10.83□□□□□ -0.68
VAMP4-202ENST00000367740 PSG5Q15238 335 aa10.83□□□□□ -0.68
VAMP4-202ENST00000367740 FAM98BQ52LJ0 330 aaKnown RBP10.83□□□□□ -0.68
VAMP4-202ENST00000367740 ASCL4Q6XD76 172 aa10.83□□□□□ -0.68
VAMP4-202ENST00000367740 GLDNQ6ZMI3 551 aaPredicted RBP10.83□□□□□ -0.68
VAMP4-202ENST00000367740 C5orf24Q7Z6I8 188 aa10.83□□□□□ -0.68
VAMP4-202ENST00000367740 TMEM163Q8TC26 289 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms