RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 NHLRC2Q8NBF2 726 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 DNAJA3Q96EY1 480 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 GNRHR2Q96P88 292 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 CCL28Q9NRJ3 127 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 CBY1Q9Y3M2 126 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 WIPI2Q9Y4P8 454 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 TRBV24-1A0A075B6N3 115 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 SERTM2A0A1B0GWG4 89 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 H0YL77 283 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 SCO1O75880 301 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 MST1P26927 711 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
VTA1-202ENST00000367630 PMCHL1Q16048 86 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 SMUG1Q53HV7 270 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 FAM214BQ7L5A3 538 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 CACNG8Q8WXS5 425 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 DLL3Q9NYJ7 618 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 C11orf94C9JXX5 98 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 SYNGR1O43759 233 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 ZIC3O60481 467 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 TMEM255AQ5JRV8 349 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 ZNF385CQ66K41 422 aaPredicted RBP6.26□□□□□ -1.41
VTA1-202ENST00000367630 DBX2Q6ZNG2 339 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 PPP1R32Q7Z5V6 425 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 LYPD6BQ8NI32 183 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 MRPL30Q8TCC3 161 aaKnown RBP6.26□□□□□ -1.41
VTA1-202ENST00000367630 NUP210LQ5VU65 1888 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 TRGV8A0A0C4DH27 118 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 M0R143 59 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 GPX4P36969 197 aaPredicted RBP6.26□□□□□ -1.41
VTA1-202ENST00000367630 KRTAP27-1Q3LI81 207 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 TMEM183AQ8IXX5 376 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 OR4B1Q8NGF8 309 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 TMEM231Q9H6L2 316 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 GRPP07492 148 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 SRP19P09132 144 aaKnown RBP6.26□□□□□ -1.41
VTA1-202ENST00000367630 CT45A10P0DMU9 189 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 HIST1H1EP10412 219 aaKnown RBP6.26□□□□□ -1.41
VTA1-202ENST00000367630 RPS20P60866 119 aaKnown RBP6.26□□□□□ -1.41
VTA1-202ENST00000367630 SUMO1P63165 101 aaKnown RBP6.26□□□□□ -1.41
VTA1-202ENST00000367630 PHYHD1Q5SRE7 291 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 BIVMQ86UB2 503 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 LIPGQ9Y5X9 500 aa6.26□□□□□ -1.41
VTA1-202ENST00000367630 MKRN2OSH3BPM6 223 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 RTN4RL2Q86UN3 420 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 FBXO17Q96EF6 278 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 IGHV3-15A0A0B4J1V0 119 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 ISLRO14498 428 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 IAPPP10997 89 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 HOXA5P20719 270 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 CD1BP29016 333 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 UCNP55089 124 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 OR1L8Q8NGR8 309 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 PCNPQ8WW12 178 aaKnown RBP6.25□□□□□ -1.41
VTA1-202ENST00000367630 THYN1Q9P016 225 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 CLDN16Q9Y5I7 305 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 TRAV30A0A087WSZ9 112 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 LNP1A1A4G5 178 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 IGSF23A1L1A6 192 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 ZNF716A6NP11 495 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 TMEM88Q6PEY1 159 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 Q6ZT83 130 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 PRR18Q8N4B5 295 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 ZNF808Q8N4W9 903 aaPredicted RBP6.25□□□□□ -1.41
VTA1-202ENST00000367630 OR5B3Q8NH48 314 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 CLDND2Q8NHS1 167 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 LRRC29Q8WV35 223 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 TNFRSF14Q92956 283 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 COL4A3Q01955 1670 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 DLL1O00548 723 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 NAPSAO96009 420 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 OR4A8P0C604 315 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 B2MP61769 119 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 BOLLQ8N9W6 283 aaKnown RBP6.25□□□□□ -1.41
VTA1-202ENST00000367630 BCL2L2Q92843 193 aaPredicted RBP6.25□□□□□ -1.41
VTA1-202ENST00000367630 A0A0U1RQK1 487 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 ZNF320A2RRD8 509 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 PHOX2AO14813 284 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 CA6P23280 308 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 GPR146Q96CH1 333 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 ESRP2Q9H6T0 727 aaKnown RBP6.25□□□□□ -1.41
VTA1-202ENST00000367630 KLF2Q9Y5W3 355 aaPredicted RBP6.25□□□□□ -1.41
VTA1-202ENST00000367630 C10orf142B7Z368 130 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 M0R1X1 148 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 TOX4O94842 621 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 GYPAP02724 150 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 AGAP20933 346 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 USF1P22415 310 aaPredicted RBP6.25□□□□□ -1.41
VTA1-202ENST00000367630 PIGYQ3MUY2 71 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 TUSC5Q8IXB3 177 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 FAM24BQ8N5W8 94 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 KCNK15Q9H427 330 aa6.25□□□□□ -1.41
VTA1-202ENST00000367630 CCDC88CQ9P219 2028 aa6.24□□□□□ -1.41
VTA1-202ENST00000367630 YPEL1O60688 119 aa6.24□□□□□ -1.41
VTA1-202ENST00000367630 SFTPCP11686 197 aa6.24□□□□□ -1.41
VTA1-202ENST00000367630 C1orf185Q5T7R7 199 aa6.24□□□□□ -1.41
VTA1-202ENST00000367630 Q6AWC8 147 aa6.24□□□□□ -1.41
VTA1-202ENST00000367630 CALHM1Q8IU99 346 aa6.24□□□□□ -1.41
VTA1-202ENST00000367630 OSR1Q8TAX0 266 aaPredicted RBP6.24□□□□□ -1.41
VTA1-202ENST00000367630 YPEL2Q96QA6 119 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms