RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 OR2T5Q6IEZ7 315 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 CD200R1LQ6Q8B3 271 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 CYP2R1Q6VVX0 501 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF575Q86XF7 245 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 SLC7A5P1Q8MH63 180 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 SUMF2Q8NBJ7 301 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR51A4Q8NGJ6 313 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR10K1Q8NGX5 313 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR2T29Q8NH02 315 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 PP6455Q8WZ26 134 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 RDH12Q96NR8 316 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 TBX5Q99593 518 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 BARHL1Q9BZE3 327 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 PARP12Q9H0J9 701 aaKnown RBP6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 FBXL15Q9H469 300 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 RANGRFQ9HD47 186 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 KRT84Q9NSB2 600 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 ARL8BQ9NVJ2 186 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 TMEM14AQ9Y6G1 99 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 UBR4Q5T4S7 5183 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 ARPC1BO15143 372 aaKnown RBP6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 RTL8CO15255 209 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 GMNNO75496 209 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 TRGV3P03979 118 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 HMGN1P05114 100 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZP3P21754 424 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 FASP25445 335 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 IL3RAP26951 378 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 RPL5P46777 297 aaKnown RBP6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 GNMTQ14749 295 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF660Q6AZW8 331 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 UNQ5815/PRO19632Q6UWF5 114 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 PPP1R27Q86WC6 154 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 SAXO1Q8IYX7 474 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 LFNGQ8NES3 379 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR13C9Q8NGT0 318 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 GIPC3Q8TF64 312 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF251Q9BRH9 671 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 DPCDQ9BVM2 203 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 CST11Q9H112 138 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 NEK6Q9HC98 313 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 NDE1Q9NXR1 346 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 TVP23BQ9NYZ1 205 aa6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
HMGB1P39-201ENST00000366304 A0A1W2PQL4 384 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 SLC22A1O15245 554 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 TXNL1O43396 289 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 MITFO75030 526 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 MT-ND2P03891 347 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 TMEM225BP0DP42 221 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 OSMP13725 252 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 GZMHP20718 246 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 PRKACGP22612 351 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR3A3P47888 321 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 NANOS3P60323 173 aaKnown RBP6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 ADARB1P78563 741 aaKnown RBP6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 SSBP2P81877 361 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 TRIM25Q14258 630 aaKnown RBP6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 DEFB114Q30KQ6 69 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 AKIRIN2Q53H80 203 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 ELP2Q6IA86 826 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 FAHD1Q6P587 224 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 SPARTQ8N0X7 666 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 TCEANCQ8N8B7 351 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR1L1Q8NH94 360 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 SPSB1Q96BD6 273 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 C10orf35Q96D05 121 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 NSL1Q96IY1 281 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF184Q99676 751 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 GGTLC1Q9BX51 225 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 REEP1Q9H902 201 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 RHOFQ9HBH0 211 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 CLN6Q9NWW5 311 aa6.31□□□□□ -1.4
HMGB1P39-201ENST00000366304 METTL15A6NJ78 407 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF670-ZNF695F2Z2N8 137 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 RRHO14718 337 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 MT-ND4P03905 459 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 GSTT2P0CG29 244 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 GSTT2BP0CG30 244 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 EFNB1P98172 346 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 GUCA2BQ16661 112 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 AADACL4Q5VUY2 407 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 LPCAT4Q643R3 524 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 PYHIN1Q6K0P9 492 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 LINC00336Q6ZUF6 198 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 LAX1Q8IWV1 398 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 DEFB107AQ8IZN7 70 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 TCTEX1D1Q8N7M0 179 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR5T1Q8NG75 326 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 SUN5Q8TC36 379 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 ABHD5Q8WTS1 349 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 CLCC1Q96S66 551 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 AIFM2Q9BRQ8 373 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZC4H2Q9NQZ6 224 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 FAM118AQ9NWS6 357 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 SLC2A8Q9NY64 477 aa6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 DMBT1Q9UGM3 2413 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P39-201ENST00000366304 C13orf42A0A1B0GVH6 325 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms