RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 GINS3Q9BRX5 216 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 ANGPTL4Q9BY76 406 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 PI4KAP42356 2102 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 OR10J4P0C629 311 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 AESQ08117 197 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 RTP5Q14D33 572 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 IL36RNQ9UBH0 155 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 TOX4O94842 621 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 NDUFB4O95168 129 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 CD5P06127 495 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 SRP19P09132 144 aaKnown RBP11.97□□□□□ -0.49
COL6A1-201ENST00000361866 MAGEA5P43359 124 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 HES3Q5TGS1 186 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 EDARADDQ8WWZ3 215 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 TBX15Q96SF7 602 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 MRPL13Q9BYD1 178 aaKnown RBP11.97□□□□□ -0.49
COL6A1-201ENST00000361866 C5orf52A6NGY3 159 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 GLIPR1P48060 266 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 MARS2Q96GW9 593 aaKnown RBP11.97□□□□□ -0.49
COL6A1-201ENST00000361866 SRXN1Q9BYN0 137 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 OR1A1Q9P1Q5 309 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 OR5B21A6NL26 309 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 C3orf80F5H4A9 247 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 EFNA2O43921 213 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 ZNF124Q15973 351 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 SCCPDHQ8NBX0 429 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 ARRDC1-AS1Q9H2J1 176 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 CBLN4Q9NTU7 201 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 ZNF581Q9P0T4 197 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 TGIF2LXQ8IUE1 241 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 OR2Z1Q8NG97 314 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 OR10G8Q8NGN5 311 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 GALNT14Q96FL9 552 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 FER1L6-AS2Q96M78 137 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 TAAR6Q96RI8 345 aa11.96□□□□□ -0.49
COL6A1-201ENST00000361866 CTXND1A0A1B0GTU2 59 aa11.96□□□□□ -0.5
COL6A1-201ENST00000361866 GNG10P50151 68 aa11.96□□□□□ -0.5
COL6A1-201ENST00000361866 UBE2G1P62253 170 aa11.96□□□□□ -0.5
COL6A1-201ENST00000361866 ABHD14BQ96IU4 210 aa11.96□□□□□ -0.5
COL6A1-201ENST00000361866 LYZL4Q96KX0 146 aa11.96□□□□□ -0.5
COL6A1-201ENST00000361866 FAM173AQ9BQD7 235 aa11.96□□□□□ -0.5
COL6A1-201ENST00000361866 ATG101Q9BSB4 218 aa11.96□□□□□ -0.5
COL6A1-201ENST00000361866 ATP23Q9Y6H3 246 aa11.96□□□□□ -0.5
COL6A1-201ENST00000361866 ARL2-SNX15V9GYD0 113 aa11.96□□□□□ -0.5
COL6A1-201ENST00000361866 IER3P46695 156 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 CEBPDP49716 269 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-201ENST00000361866 FGF12P61328 243 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 RAB9BQ9NP90 201 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 PROB1E7EW31 1015 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 ST8SIA5O15466 376 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-201ENST00000361866 HOXA5P20719 270 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 CAMPP49913 170 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 HNRNPA3P51991 378 aaKnown RBP11.95□□□□□ -0.5
COL6A1-201ENST00000361866 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 MZT1Q08AG7 82 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 MRPL54Q6P161 138 aaKnown RBP11.95□□□□□ -0.5
COL6A1-201ENST00000361866 LYG1Q8N1E2 194 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 FGFRL1Q8N441 504 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 TMEM178AQ8NBL3 297 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 OR1P1Q8NH06 330 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 TAF15Q92804 592 aaKnown RBP eCLIP11.95□□□□□ -0.5
COL6A1-201ENST00000361866 ELOVL1Q9BW60 279 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 CREBBPQ92793 2442 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 ZNF729A6NN14 1252 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-201ENST00000361866 ZIC3O60481 467 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 ZNF253O75346 499 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 MPLP40238 635 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 MOB1BQ7L9L4 216 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 OR5A2Q8NGI9 324 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 RCC1LQ96I51 464 aaKnown RBP11.95□□□□□ -0.5
COL6A1-201ENST00000361866 OR2J1Q9GZK6 312 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 BARX1Q9HBU1 254 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-201ENST00000361866 GOLT1BQ9Y3E0 138 aa11.95□□□□□ -0.5
COL6A1-201ENST00000361866 FNDC1Q4ZHG4 1894 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-201ENST00000361866 TRBV6-7A0A0A0MS04 114 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 A0A1W2PQM1 296 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 TNFSF4P23510 183 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 CNN1P51911 297 aaKnown RBP11.94□□□□□ -0.5
COL6A1-201ENST00000361866 SERF2P84101 59 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 OR5I1Q13606 314 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 SMIM21Q3B7S5 101 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 ZNF718Q3SXZ3 478 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 RAB24Q969Q5 203 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 KLF13Q9Y2Y9 288 aaPredicted RBP11.94□□□□□ -0.5
COL6A1-201ENST00000361866 MPC1Q9Y5U8 109 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 TRAV38-1A0A0B4J264 116 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 LRRC3CA6NJW4 275 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 H0Y980 276 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 SPRY3O43610 288 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 LINC00271P0C7V0 271 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 TMPRSS7Q7RTY8 843 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 COMMD5Q9GZQ3 224 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 GRIFINA4D1Z8 144 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 NPIPB13A6NJU9 1138 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 NPIPB4C9JG80 1138 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 UBE2CO00762 179 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 SUCLG1P53597 346 aaKnown RBP11.94□□□□□ -0.5
COL6A1-201ENST00000361866 OR4P4Q8NGL7 312 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms